Factsheet for Bra013630.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79167	Canola	mitochondrion	100.0	100.0
CDY71452	Canola	mitochondrion	98.12	98.74
AT4G22620.1	Thale cress	mitochondrion	89.38	89.38
Bra020841.1-P	Field mustard	mitochondrion	88.75	89.31
Bra019369.1-P	Field mustard	mitochondrion	81.88	86.18
Bra029452.1-P	Field mustard	mitochondrion	78.75	78.75
Bra000772.1-P	Field mustard	mitochondrion	75.0	72.73
Bra018478.1-P	Field mustard	mitochondrion	63.75	69.86
Bra029934.1-P	Field mustard	mitochondrion	63.12	55.49
PGSC0003DMT400032631	Potato	cytosol	30.62	53.26
PGSC0003DMT400012211	Potato	mitochondrion	39.38	51.64
Solyc08g079130.1.1	Tomato	mitochondrion	40.62	48.51
KRH04072	Soybean	cytosol	35.62	47.5
Solyc08g079150.1.1	Tomato	mitochondrion	46.88	46.3
KRH57344	Soybean	mitochondrion	35.0	46.28
PGSC0003DMT400012209	Potato	mitochondrion	46.88	45.73
GSMUA_Achr5P15270_001	Banana	mitochondrion	23.12	45.68
Solyc08g079140.1.1	Tomato	mitochondrion	41.88	45.27
PGSC0003DMT400012210	Potato	mitochondrion	40.62	43.92
VIT_02s0154g00010.t01	Wine grape	mitochondrion	44.38	43.56
Bra014476.1-P	Field mustard	mitochondrion	42.5	40.0
Bra007552.1-P	Field mustard	mitochondrion	40.62	38.24
Bra000380.1-P	Field mustard	mitochondrion	38.12	37.89
Bra007639.1-P	Field mustard	cytosol	28.12	37.82
GSMUA_Achr1P01750_001	Banana	mitochondrion	40.0	36.99
Bra039264.1-P	Field mustard	cytosol	26.88	36.13
Os04t0537100-01	Rice	mitochondrion	35.0	33.53
TraesCS2A01G386400.1	Wheat	mitochondrion	34.38	33.13
HORVU2Hr1G092070.1	Barley	mitochondrion	33.75	32.73
TraesCS2B01G403800.1	Wheat	mitochondrion	33.75	32.53
Bra037405.1-P	Field mustard	cytosol	26.88	31.85
TraesCS6B01G286100.1	Wheat	mitochondrion	36.25	31.69
TraesCS2D01G383200.1	Wheat	mitochondrion	31.88	31.48
TraesCS6D01G220700.1	Wheat	mitochondrion	35.62	31.32
Bra004515.1-P	Field mustard	cytosol	23.75	31.15
TraesCS6A01G238300.1	Wheat	mitochondrion	35.62	30.81
Os02t0643800-01	Rice	mitochondrion	35.62	30.0
EES11187	Sorghum	mitochondrion	31.88	29.14
Zm00001d002826_P001	Maize	mitochondrion	31.88	28.65
Zm00001d025947_P001	Maize	mitochondrion	31.25	28.57
Zm00001d051302_P001	Maize	mitochondrion	35.0	28.14
Bra022663.1-P	Field mustard	cytosol	22.5	28.12
Zm00001d017397_P001	Maize	mitochondrion	34.38	27.78
EES07542	Sorghum	mitochondrion	35.62	27.54
Bra003044.1-P	Field mustard	cytosol	23.12	24.67

Protein Annotations

EnsemblPlants:Bra013630.1	EnsemblPlants:Bra013630.1-P	EnsemblPlantsGene:Bra013630	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI0002545745	UniProt:M4DAX0
MapMan:35.1	:	:	:	:	:

Description

AT4G22620 (E=5e-079) | auxin-responsive family protein

Coordinates

chrA01:+:6727190..6727672

Molecular Weight (calculated)

18394.9 Da

IEP (calculated)

11.658

GRAVY (calculated)

-0.337

Length

160 amino acids

Sequence
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRIQTGK RQCLTGILNP VQKICSLARC LRRGANRLCG GKKTGQTRLG NEPKPAAVPK GHLVVHVGEA GDDTRRVVVP
101: VIYFNHPLFG ELLEQAERVY GFEQSGRITI PCRVSDFEKV QMRIAAWDRC RQKRTFKIIL

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.