Factsheet for Bra019369.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98761	Canola	mitochondrion	98.68	98.68
CDX94106	Canola	mitochondrion	98.03	98.03
Bra013630.1-P	Field mustard	mitochondrion	86.18	81.88
Bra020841.1-P	Field mustard	mitochondrion	84.21	80.5
AT4G22620.1	Thale cress	mitochondrion	84.21	80.0
Bra029452.1-P	Field mustard	mitochondrion	75.66	71.88
Bra000772.1-P	Field mustard	mitochondrion	75.0	69.09
Bra018478.1-P	Field mustard	mitochondrion	63.16	65.75
Bra029934.1-P	Field mustard	mitochondrion	74.34	62.09
PGSC0003DMT400032631	Potato	cytosol	30.92	51.09
KRH04072	Soybean	cytosol	38.82	49.17
PGSC0003DMT400012211	Potato	mitochondrion	38.82	48.36
KRH57344	Soybean	mitochondrion	38.16	47.93
Solyc08g079130.1.1	Tomato	mitochondrion	39.47	44.78
Solyc08g079150.1.1	Tomato	mitochondrion	44.08	41.36
Solyc08g079140.1.1	Tomato	mitochondrion	40.13	41.22
PGSC0003DMT400012209	Potato	mitochondrion	44.08	40.85
VIT_02s0154g00010.t01	Wine grape	mitochondrion	43.42	40.49
PGSC0003DMT400012210	Potato	mitochondrion	38.82	39.86
GSMUA_Achr5P15270_001	Banana	mitochondrion	21.05	39.51
Bra007639.1-P	Field mustard	cytosol	28.95	36.97
Bra039264.1-P	Field mustard	cytosol	28.29	36.13
Bra000380.1-P	Field mustard	mitochondrion	36.84	34.78
GSMUA_Achr1P01750_001	Banana	mitochondrion	37.5	32.95
Bra014476.1-P	Field mustard	mitochondrion	36.84	32.94
Bra007552.1-P	Field mustard	mitochondrion	36.84	32.94
TraesCS2A01G386400.1	Wheat	mitochondrion	35.53	32.53
Os04t0537100-01	Rice	mitochondrion	35.53	32.34
HORVU2Hr1G092070.1	Barley	mitochondrion	34.87	32.12
TraesCS2B01G403800.1	Wheat	mitochondrion	34.87	31.93
Bra004515.1-P	Field mustard	cytosol	25.0	31.15
TraesCS2D01G383200.1	Wheat	mitochondrion	32.89	30.86
TraesCS6B01G286100.1	Wheat	mitochondrion	36.84	30.6
Bra037405.1-P	Field mustard	cytosol	26.97	30.37
TraesCS6D01G220700.1	Wheat	mitochondrion	36.18	30.22
TraesCS6A01G238300.1	Wheat	mitochondrion	36.18	29.73
Os02t0643800-01	Rice	mitochondrion	36.18	28.95
EES11187	Sorghum	mitochondrion	32.89	28.57
Zm00001d025947_P001	Maize	mitochondrion	32.89	28.57
Bra022663.1-P	Field mustard	cytosol	23.68	28.12
Zm00001d002826_P001	Maize	mitochondrion	32.24	27.53
Zm00001d017397_P001	Maize	mitochondrion	35.53	27.27
Zm00001d051302_P001	Maize	mitochondrion	35.53	27.14
EES07542	Sorghum	mitochondrion	36.18	26.57
Bra003044.1-P	Field mustard	cytosol	24.34	24.67

Protein Annotations

EnsemblPlants:Bra019369.1	EnsemblPlants:Bra019369.1-P	EnsemblPlantsGene:Bra019369	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI0002540D9D	UniProt:M4DS76
MapMan:35.1	:	:	:	:	:

Description

AT4G22620 (E=3e-069) | auxin-responsive family protein

Coordinates

chrA03:+:24641262..24641720

Molecular Weight (calculated)

17541.6 Da

IEP (calculated)

10.957

GRAVY (calculated)

-0.311

Length

152 amino acids

Sequence
(BLAST)

001: MKRLQGFKIF KWIIRSRRIQ TGKRQCLTGI LNPVSRICYL ARCLRRGASR LCGGKKTVQT RLGNDPESLG VPKGHLVVHV GESGDDTRRV VVPVFYFNHP
101: LFGELLEQAE RVYGFDQPGR ITIPCRVSDF EQVQMKIAAW DHCRRKWSFK IL

Best Arabidopsis Sequence Match ( AT4G22620.1 )
(BLAST)

001: MKRLRGFKIG HRFVKIFKWI IRSRRNQTGK RQCLTGILNP VTKIYSLARR CLRRGANRLC GGMKPGQTRL GNEPKTPTVP RGHLVVHVGE SGEDTRRVVV
101: PVIYFNHPLF GELLEQAERV YGFEQPGRIM IPCRVSDFEK VQMRIAAWDH CRRKSTFKIL

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.