Factsheet for Bra029452.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86707	Canola	mitochondrion	99.38	99.38
Bra000772.1-P	Field mustard	mitochondrion	87.5	84.85
AT4G12410.1	Thale cress	mitochondrion	80.62	82.17
Bra013630.1-P	Field mustard	mitochondrion	78.75	78.75
Bra018478.1-P	Field mustard	mitochondrion	71.25	78.08
Bra020841.1-P	Field mustard	mitochondrion	75.62	76.1
Bra019369.1-P	Field mustard	mitochondrion	71.88	75.66
PGSC0003DMT400032631	Potato	cytosol	29.38	51.09
PGSC0003DMT400012211	Potato	mitochondrion	38.75	50.82
Solyc08g079130.1.1	Tomato	mitochondrion	40.62	48.51
GSMUA_Achr5P15270_001	Banana	mitochondrion	24.38	48.15
PGSC0003DMT400012209	Potato	mitochondrion	48.12	46.95
Bra029934.1-P	Field mustard	mitochondrion	53.12	46.7
KRH04072	Soybean	cytosol	35.0	46.67
Solyc08g079150.1.1	Tomato	mitochondrion	46.25	45.68
KRH57344	Soybean	mitochondrion	34.38	45.45
Solyc08g079140.1.1	Tomato	mitochondrion	40.62	43.92
VIT_02s0154g00010.t01	Wine grape	mitochondrion	44.38	43.56
PGSC0003DMT400012210	Potato	mitochondrion	40.0	43.24
Bra014476.1-P	Field mustard	mitochondrion	45.62	42.94
Bra007552.1-P	Field mustard	mitochondrion	42.5	40.0
GSMUA_Achr1P01750_001	Banana	mitochondrion	41.88	38.73
Bra000380.1-P	Field mustard	mitochondrion	36.88	36.65
Bra007639.1-P	Field mustard	cytosol	26.88	36.13
Bra039264.1-P	Field mustard	cytosol	26.25	35.29
Os04t0537100-01	Rice	mitochondrion	35.62	34.13
TraesCS2A01G386400.1	Wheat	mitochondrion	35.0	33.73
HORVU2Hr1G092070.1	Barley	mitochondrion	33.75	32.73
TraesCS2B01G403800.1	Wheat	mitochondrion	33.75	32.53
TraesCS2D01G383200.1	Wheat	mitochondrion	32.5	32.1
TraesCS6B01G286100.1	Wheat	mitochondrion	35.62	31.15
TraesCS6D01G220700.1	Wheat	mitochondrion	35.0	30.77
Bra037405.1-P	Field mustard	cytosol	25.62	30.37
Bra004515.1-P	Field mustard	cytosol	23.12	30.33
TraesCS6A01G238300.1	Wheat	mitochondrion	35.0	30.27
Os02t0643800-01	Rice	mitochondrion	35.62	30.0
EES11187	Sorghum	mitochondrion	32.5	29.71
Zm00001d002826_P001	Maize	mitochondrion	32.5	29.21
Zm00001d025947_P001	Maize	mitochondrion	31.25	28.57
Bra022663.1-P	Field mustard	cytosol	22.5	28.12
EES07542	Sorghum	mitochondrion	36.25	28.02
Zm00001d017397_P001	Maize	mitochondrion	34.38	27.78
Zm00001d051302_P001	Maize	mitochondrion	34.38	27.64
Bra003044.1-P	Field mustard	cytosol	23.12	24.67

Protein Annotations

EnsemblPlants:Bra029452.1	EnsemblPlants:Bra029452.1-P	EnsemblPlantsGene:Bra029452	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF42	PFAM:PF02519	UniParc:UPI0001B63A4D	UniProt:M4EKY5
MapMan:35.1	:	:	:	:	:

Description

AT4G12410 (E=9e-070) | auxin-responsive family protein

Coordinates

chrA09:+:17972851..17973333

Molecular Weight (calculated)

18487.9 Da

IEP (calculated)

11.936

GRAVY (calculated)

-0.568

Length

160 amino acids

Sequence
(BLAST)

001: MKRVRGFKIG HRSVKIFKWI RSRRIRTMKR QYRSRITNPI AGIRSLARCL SHGAKRLCGG KNDSGQGQIR LGKDPKTAVP KGHLVVHVGE SDGDTRRVVV
101: PVIYFNHPLF GELLEQAERV HGFHQPGRIT IPCRVSDFEK VQMRIAAWDH CRRKRTYKIL

Best Arabidopsis Sequence Match ( AT4G12410.1 )
(BLAST)

001: MKRVRGFKIG HRFVKIFKWI PRNRCPTRIT NPVTGIRSLA RCLSRGAKRL CGGSKKNPGQ NQIRLGKDPK KSNRVVPRGH LVVHVGESDD DTRRVVVPVI
101: YFNHPLFGEL LEQAERVHGF DQPGRITIPC RVSDFEKVQL RIAAWDHCRR KNSYKII

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9STH0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.