Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034957.1-P | Field mustard | nucleus | 98.92 | 98.92 |
| AT3G43240.1 | Thale cress | cytosol, nucleus, vacuole | 90.82 | 90.09 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 67.34 | 67.43 |
| Os09t0434000-01 | Rice | cytosol | 8.23 | 66.3 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 63.97 | 61.4 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 63.16 | 60.7 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 59.11 | 56.81 |
| Zm00001d020593_P002 | Maize | nucleus, plastid | 57.76 | 55.73 |
| KXG35687 | Sorghum | nucleus | 57.09 | 55.01 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 57.35 | 54.91 |
| HORVU5Hr1G063000.2 | Barley | plastid | 56.82 | 54.6 |
| Zm00001d005794_P009 | Maize | nucleus, plastid | 57.09 | 54.3 |
| GSMUA_Achr11P... | Banana | nucleus | 53.04 | 54.13 |
| TraesCS5B01G214600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.95 | 54.1 |
| KXG25261 | Sorghum | nucleus | 54.66 | 54.07 |
| Zm00001d032096_P005 | Maize | cytosol, nucleus, vacuole | 54.52 | 53.94 |
| TraesCS5A01G216100.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.68 | 53.85 |
| TraesCS5D01G224100.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.55 | 53.72 |
| Os09t0434100-01 | Rice | plastid | 18.89 | 47.46 |
| Os08t0451400-01 | Rice | nucleus, plastid | 48.04 | 46.78 |
| Os08t0451700-03 | Rice | plastid | 27.53 | 43.97 |
| KXG38052 | Sorghum | cytosol, extracellular, nucleus | 4.32 | 40.0 |
| Os08t0361000-01 | Rice | mitochondrion, plastid | 9.31 | 35.75 |
| Os08t0451500-01 | Rice | mitochondrion | 7.02 | 31.33 |
Protein Annotations
| Gene3D:1.10.150.60 | MapMan:15.5.25 | Gene3D:3.30.40.10 | GO:A0A078FD75 | UniProt:A0A078FD75 | InterPro:ARID_dom |
| InterPro:ARID_dom_sf | EnsemblPlants:CDY12335 | ProteinID:CDY12335 | ProteinID:CDY12335.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00061472001 | InterPro:IPR001606 | InterPro:IPR013083 | InterPro:IPR036431 | PFAM:PF01388 |
| PFscan:PS51011 | PANTHER:PTHR22970 | PANTHER:PTHR22970:SF40 | SMART:SM00249 | SMART:SM01014 | SUPFAM:SSF46774 |
| SUPFAM:SSF57903 | UniParc:UPI0004EEC111 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA06g20090DAT-rich interactive domain-containing protein 4 [Source:Projected from Arabidopsis thaliana (AT3G43240) UniProtKB/Swiss-Prot;Acc:Q6NQ79]
Coordinates
chrLK032020:+:456070..468706
Molecular Weight (calculated)
82218.7 Da
IEP (calculated)
7.106
GRAVY (calculated)
-0.298
Length
741 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFHAQSRCN VLAVVSGEHC DNQKGEAHQP RYPFPDLSSS GRLKFQVLNN PTTEEFQVAI NSSAPDIVYL QGEQSGDTDQ VGPLVFRYAD FSTPDALFTL
101: FGSSIPTTVY LELPNGEELA QALYSKGAQY VIYWKNVFSK YAACHFRHAL FSIIQSSCSD TWDAFQVAEA SFRLYCTSNS DLLSSDINRK INYEMGPCPC
201: LLGDPPKIDV VTPGADELED ENSLESLPSI NIYDEDVTVR FLLCGPPCTV DTFLLGSLVD GLNALLRIEM RGSKLHNRSS APAPPLQAGT FTRGVVTMRC
301: DISTCSSAHI SMLVSGNAQT CFTEFLLENH IKHEVVEKIQ LVHSVVNSEE TKQVFSEPRK SASIACGASV YEVSMQVPTW ALQVLRQLAP DVSYRSLVVL
401: GVASIQGLSV ASFEKDDAQR LLFFCGKQIS DTTNHDALLS QIPHWLTPPL PSRKRSEPCR ENKEMENGRP TSKKINVAAL RPIPHTRRHK MIPFSGYSEI
501: GRFDGDHTKG SLPMPPKHGA SGGTPVTHRK AFSGSYQRKQ IISLNPLPLK KHDCGRAHIQ ICSEEEFLRD VMQFLVIRGH SRLVPPGGLA EFPDAVLNSK
601: RLDLFNLYRE VVSRGGFHVG NGINWKGQVF SKMRNHTLTN RMTGVGNTLK RHYETYLLEY EYAHDDVDGE CCLICRSSTA GDWVNCGSCG EWAHFGCDRR
701: PGLGAFKDYA KTDGLEYVCP NCSVSNYRKK SQKSSNGLLV P
101: FGSSIPTTVY LELPNGEELA QALYSKGAQY VIYWKNVFSK YAACHFRHAL FSIIQSSCSD TWDAFQVAEA SFRLYCTSNS DLLSSDINRK INYEMGPCPC
201: LLGDPPKIDV VTPGADELED ENSLESLPSI NIYDEDVTVR FLLCGPPCTV DTFLLGSLVD GLNALLRIEM RGSKLHNRSS APAPPLQAGT FTRGVVTMRC
301: DISTCSSAHI SMLVSGNAQT CFTEFLLENH IKHEVVEKIQ LVHSVVNSEE TKQVFSEPRK SASIACGASV YEVSMQVPTW ALQVLRQLAP DVSYRSLVVL
401: GVASIQGLSV ASFEKDDAQR LLFFCGKQIS DTTNHDALLS QIPHWLTPPL PSRKRSEPCR ENKEMENGRP TSKKINVAAL RPIPHTRRHK MIPFSGYSEI
501: GRFDGDHTKG SLPMPPKHGA SGGTPVTHRK AFSGSYQRKQ IISLNPLPLK KHDCGRAHIQ ICSEEEFLRD VMQFLVIRGH SRLVPPGGLA EFPDAVLNSK
601: RLDLFNLYRE VVSRGGFHVG NGINWKGQVF SKMRNHTLTN RMTGVGNTLK RHYETYLLEY EYAHDDVDGE CCLICRSSTA GDWVNCGSCG EWAHFGCDRR
701: PGLGAFKDYA KTDGLEYVCP NCSVSNYRKK SQKSSNGLLV P
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [cytosol,nucleus,vacuole]
SUBAcon: [cytosol,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.