Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35687 | Sorghum | nucleus | 97.66 | 97.53 |
| Zm00001d005794_P009 | Maize | nucleus, plastid | 95.7 | 94.35 |
| HORVU5Hr1G063000.2 | Barley | plastid | 85.94 | 85.6 |
| Os09t0434100-01 | Rice | plastid | 32.68 | 85.08 |
| TraesCS5B01G214600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 86.2 | 84.87 |
| TraesCS5A01G216100.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 86.2 | 84.87 |
| TraesCS5D01G224100.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 85.81 | 84.49 |
| Zm00001d032096_P005 | Maize | cytosol, nucleus, vacuole | 71.35 | 73.16 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 65.62 | 65.37 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 61.07 | 63.38 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 62.63 | 62.14 |
| GSMUA_Achr11P... | Banana | nucleus | 57.16 | 60.47 |
| VIT_09s0002g00430.t01 | Wine grape | nucleus | 60.94 | 60.47 |
| PGSC0003DMT400074246 | Potato | cytosol, mitochondrion, nucleus, vacuole | 59.11 | 58.96 |
| Solyc12g049570.1.1 | Tomato | nucleus | 58.98 | 58.75 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 58.46 | 58.16 |
| AT3G43240.1 | Thale cress | cytosol, nucleus, vacuole | 56.25 | 57.83 |
| CDY12335 | Canola | nucleus | 55.73 | 57.76 |
| Bra034957.1-P | Field mustard | nucleus | 55.6 | 57.62 |
| KRH06271 | Soybean | nucleus | 58.07 | 57.03 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 57.03 | 56.81 |
| KRH47705 | Soybean | nucleus | 57.42 | 56.61 |
Protein Annotations
| Gene3D:1.10.150.60 | MapMan:15.5.25 | Gene3D:3.30.40.10 | UniProt:A0A1D6I4W3 | InterPro:ARID_dom | InterPro:ARID_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR001606 | InterPro:IPR013083 | InterPro:IPR036431 |
| ProteinID:ONM55187.1 | ProteinID:ONM55188.1 | ProteinID:ONM55190.1 | PFAM:PF01388 | PFscan:PS51011 | PANTHER:PTHR22970 |
| PANTHER:PTHR22970:SF40 | SMART:SM01014 | SUPFAM:SSF46774 | SUPFAM:SSF57903 | UniParc:UPI0004DE87AC | EnsemblPlantsGene:Zm00001d020593 |
| EnsemblPlants:Zm00001d020593_P002 | EnsemblPlants:Zm00001d020593_T002 | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
ARID-transcription factor 4AT-rich interactive domain-containing protein 4
Coordinates
chr7:-:123984904..123992900
Molecular Weight (calculated)
84705.2 Da
IEP (calculated)
7.818
GRAVY (calculated)
-0.313
Length
768 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQIQSFSRN NCALLAVLCG KYAENRTPAA RSGLEAKRPR PAYPFPELSS AGRLEVHTLF NPTPEQFLEA QRVVQPNFLY IQGQQLEDEK EIGSLVWGDA
101: DVSDPQAFST LISPPFPTIV YLEVPIGEKL AQAVHSKGIP YVIYWRNSFS SYAASHFRHA LMSAIQSSVS HTWDAFQLAH ASFRLYCVRN NHVQSVKLGP
201: RLLGDAPKIN ISPPETEMVD EEGSSEVTPA IKIYDEEINM KLLLCGVPCT LDPCLLGSLE DGLNALLNIE IRGSKLQNRI SASPPPLEAA SLPRGMVTMR
301: CDISTCSSSH VSLLVSGSAQ TCFDDQLLES HIKNEIIEKS QLVRALSNSE DKLPSSEPLT SMSTACGAST FEVWMSLPKW AAQVLKHLAP DISYRSLVAL
401: GIGCINGTPV ASFERRDADR LLFFCTSQCK DLANENGPYF HLPRWSASLT KDRTKVGSES KQNLLGANGV LEDKKHMMEG PSSWSAVKAK LKPATMRPIP
501: HSRKQQMHPF MGFPETSLHE TSIVKPSLPA APTVKHNSVS SATTTHRKST SGPSHTPSVI QLNPLPMKKH GCDRLPIQVC SEEDFLKDVM QFLIQRGHNR
601: LVPHGGLAEF PDAILNAKRL DLYNLYKEVV SRGGFYVGNG INWKGQVFSK MRNHTATNRM TGVGNTLKRH YETYLLEYEL AHDDVDGECC LLCHSSAPGD
701: WVNCGLCGEW AHFGCDRRQG LGTFKDYAKT DGLEYICPHC SLANYKKKPP PPKAANGFSN TASVPRNA
101: DVSDPQAFST LISPPFPTIV YLEVPIGEKL AQAVHSKGIP YVIYWRNSFS SYAASHFRHA LMSAIQSSVS HTWDAFQLAH ASFRLYCVRN NHVQSVKLGP
201: RLLGDAPKIN ISPPETEMVD EEGSSEVTPA IKIYDEEINM KLLLCGVPCT LDPCLLGSLE DGLNALLNIE IRGSKLQNRI SASPPPLEAA SLPRGMVTMR
301: CDISTCSSSH VSLLVSGSAQ TCFDDQLLES HIKNEIIEKS QLVRALSNSE DKLPSSEPLT SMSTACGAST FEVWMSLPKW AAQVLKHLAP DISYRSLVAL
401: GIGCINGTPV ASFERRDADR LLFFCTSQCK DLANENGPYF HLPRWSASLT KDRTKVGSES KQNLLGANGV LEDKKHMMEG PSSWSAVKAK LKPATMRPIP
501: HSRKQQMHPF MGFPETSLHE TSIVKPSLPA APTVKHNSVS SATTTHRKST SGPSHTPSVI QLNPLPMKKH GCDRLPIQVC SEEDFLKDVM QFLIQRGHNR
601: LVPHGGLAEF PDAILNAKRL DLYNLYKEVV SRGGFYVGNG INWKGQVFSK MRNHTATNRM TGVGNTLKRH YETYLLEYEL AHDDVDGECC LLCHSSAPGD
701: WVNCGLCGEW AHFGCDRRQG LGTFKDYAKT DGLEYICPHC SLANYKKKPP PPKAANGFSN TASVPRNA
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [cytosol,nucleus,vacuole]
SUBAcon: [cytosol,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.