Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12335 | Canola | nucleus | 90.09 | 90.82 |
| Bra034957.1-P | Field mustard | nucleus | 89.96 | 90.69 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 68.41 | 69.05 |
| Os09t0434000-01 | Rice | cytosol | 8.17 | 66.3 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 64.39 | 62.31 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 63.05 | 61.09 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 58.5 | 56.68 |
| Zm00001d020593_P002 | Maize | nucleus, plastid | 57.83 | 56.25 |
| KXG35687 | Sorghum | nucleus | 57.43 | 55.79 |
| HORVU5Hr1G063000.2 | Barley | plastid | 57.3 | 55.51 |
| GSMUA_Achr11P... | Banana | nucleus | 53.55 | 55.1 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 57.03 | 55.04 |
| Zm00001d005794_P009 | Maize | nucleus, plastid | 57.16 | 54.81 |
| TraesCS5B01G214600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 57.16 | 54.74 |
| TraesCS5A01G216100.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.89 | 54.49 |
| TraesCS5D01G224100.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.76 | 54.36 |
| Zm00001d032096_P005 | Maize | cytosol, nucleus, vacuole | 54.22 | 54.07 |
| KXG25261 | Sorghum | nucleus | 54.08 | 53.94 |
| Os09t0434100-01 | Rice | plastid | 19.28 | 48.81 |
| Os08t0451400-01 | Rice | nucleus, plastid | 47.39 | 46.52 |
| Os08t0451700-03 | Rice | plastid | 27.71 | 44.61 |
| KXG38052 | Sorghum | cytosol, extracellular, nucleus | 4.28 | 40.0 |
| Os08t0361000-01 | Rice | mitochondrion, plastid | 9.1 | 35.23 |
| Os08t0451500-01 | Rice | mitochondrion | 7.23 | 32.53 |
Protein Annotations
| Gene3D:1.10.150.60 | MapMan:15.5.25 | Gene3D:3.30.40.10 | EntrezGene:823399 | ProteinID:AEE77778.1 | InterPro:ARID_dom |
| InterPro:ARID_dom_sf | ArrayExpress:AT3G43240 | EnsemblPlantsGene:AT3G43240 | RefSeq:AT3G43240 | TAIR:AT3G43240 | RefSeq:AT3G43240-TAIR-G |
| EnsemblPlants:AT3G43240.1 | TAIR:AT3G43240.1 | EMBL:BT010580 | ProteinID:CAB89045.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR001606 | InterPro:IPR013083 | InterPro:IPR036431 | RefSeq:NP_189910.2 |
| PFAM:PF01388 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51011 | PANTHER:PTHR22970 | PANTHER:PTHR22970:SF40 | UniProt:Q6NQ79 | SMART:SM00249 | SMART:SM00501 |
| SMART:SM01014 | SUPFAM:SSF46774 | SUPFAM:SSF57903 | UniParc:UPI00001CE166 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
Coordinates
chr3:-:15209831..15214947
Molecular Weight (calculated)
82572.0 Da
IEP (calculated)
6.943
GRAVY (calculated)
-0.312
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.