Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38052 | Sorghum | cytosol, extracellular, nucleus | 9.61 | 90.0 |
| KXG25261 | Sorghum | nucleus | 88.38 | 88.38 |
| Zm00001d020593_P002 | Maize | nucleus, plastid | 73.16 | 71.35 |
| Zm00001d005794_P009 | Maize | nucleus, plastid | 72.5 | 69.7 |
| Os08t0451700-03 | Rice | plastid | 38.58 | 62.28 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 62.62 | 60.83 |
| Os08t0451400-01 | Rice | nucleus, plastid | 61.55 | 60.58 |
| GSMUA_Achr11P... | Banana | nucleus | 57.41 | 59.23 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 58.48 | 59.19 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 60.48 | 58.53 |
| VIT_09s0002g00430.t01 | Wine grape | nucleus | 57.41 | 55.56 |
| PGSC0003DMT400074246 | Potato | cytosol, mitochondrion, nucleus, vacuole | 56.07 | 54.55 |
| CDY12335 | Canola | nucleus | 53.94 | 54.52 |
| Bra034957.1-P | Field mustard | nucleus | 53.94 | 54.52 |
| AT3G43240.1 | Thale cress | cytosol, nucleus, vacuole | 54.07 | 54.22 |
| Solyc12g049570.1.1 | Tomato | nucleus | 55.67 | 54.09 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 54.74 | 53.11 |
| Os08t0451500-01 | Rice | mitochondrion | 11.75 | 53.01 |
| KRH06271 | Soybean | nucleus | 54.61 | 52.3 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 53.81 | 52.27 |
| KRH47705 | Soybean | nucleus | 53.81 | 51.73 |
Protein Annotations
| Gene3D:1.10.150.60 | EntrezGene:100191457 | MapMan:15.5.25 | Gene3D:3.30.40.10 | InterPro:ARID_dom | InterPro:ARID_dom_sf |
| UniProt:B4F8W0 | EMBL:BT033548 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR001606 |
| InterPro:IPR013083 | InterPro:IPR036431 | ProteinID:ONM04370.1 | ProteinID:ONM04373.1 | ProteinID:ONM04380.1 | PFAM:PF01388 |
| PFscan:PS51011 | PANTHER:PTHR22970 | PANTHER:PTHR22970:SF1 | SMART:SM00249 | SMART:SM01014 | SUPFAM:SSF46774 |
| SUPFAM:SSF57903 | UniParc:UPI00017B60C9 | EnsemblPlantsGene:Zm00001d032096 | EnsemblPlants:Zm00001d032096_P005 | EnsemblPlants:Zm00001d032096_T005 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
ARID-transcription factor 9AT-rich interactive domain-containing protein 4
Coordinates
chr1:+:212544499..212560640
Molecular Weight (calculated)
83174.7 Da
IEP (calculated)
7.201
GRAVY (calculated)
-0.241
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQIQNTMRQ NCTLLAVLCG EFAEKRQTPA SLAPDTKRLR LSYPFPELAS SGRLEVHTLI NPTLEQFREA QQAVHPVFLY LQGQQQENEE EIGTLVWGDT
101: DLSDPQMFVS LITPPFPTMV YLEVPTGEKL AQSLHSKGIP YVVYWRNLFS SYTASHFRHA LMSVIQSSCS HTWDAFQLAH ASFRLYCVRN NHVQSVKLGP
201: CLLGDAPKTN VIPAGDEVNE EQGCSEGFPD IRIYDEDVSM KFLLCGVPCT LDACLLGALE DGLNALLNIE IRASKLQNRA SAHPPLQAED LPHGVVTMRC
301: DITTCSSAHV SFLVSCSAQT CFDDQLLGSR IKNEIIEKRQ LVRALLNNED NKPSSYEPLP SMCVACGAST FEVWITMPKW AAQVLKHLAP EISYRSLVAL
401: GIAWVNGTPV SSFDRQDADR LLFFCSNQCG DQAIQNGSYA HVSSWSAPLT KDRTTGSLES KQMSFGAKGV VGDNTISLSS LKPRLKPATM RPLPHSRKQQ
501: MHPFMGFPQS IIHDASQVKP SLPAPPVKHN AVPVTAVTPR KSSSGSPSSW SRVQLPIPLN PLPIKKHECN RLPIHSCSEE DFLKDVMQFL LQRGHIRLVP
601: QGGLAEFPDA VLNSKRLDLY NLYKEVVYRG GFYVGNGINW KGQIFSKMHN HTVTNKMTGV GNTLKRHYET YLLEYELAHD DIDGECCLIC HSGALGDWVN
701: CGLCGEWAHL GCDRRKGLST FKDYSKADGM EYICPQCSLA KYKPPLPAP
101: DLSDPQMFVS LITPPFPTMV YLEVPTGEKL AQSLHSKGIP YVVYWRNLFS SYTASHFRHA LMSVIQSSCS HTWDAFQLAH ASFRLYCVRN NHVQSVKLGP
201: CLLGDAPKTN VIPAGDEVNE EQGCSEGFPD IRIYDEDVSM KFLLCGVPCT LDACLLGALE DGLNALLNIE IRASKLQNRA SAHPPLQAED LPHGVVTMRC
301: DITTCSSAHV SFLVSCSAQT CFDDQLLGSR IKNEIIEKRQ LVRALLNNED NKPSSYEPLP SMCVACGAST FEVWITMPKW AAQVLKHLAP EISYRSLVAL
401: GIAWVNGTPV SSFDRQDADR LLFFCSNQCG DQAIQNGSYA HVSSWSAPLT KDRTTGSLES KQMSFGAKGV VGDNTISLSS LKPRLKPATM RPLPHSRKQQ
501: MHPFMGFPQS IIHDASQVKP SLPAPPVKHN AVPVTAVTPR KSSSGSPSSW SRVQLPIPLN PLPIKKHECN RLPIHSCSEE DFLKDVMQFL LQRGHIRLVP
601: QGGLAEFPDA VLNSKRLDLY NLYKEVVYRG GFYVGNGINW KGQIFSKMHN HTVTNKMTGV GNTLKRHYET YLLEYELAHD DIDGECCLIC HSGALGDWVN
701: CGLCGEWAHL GCDRRKGLST FKDYSKADGM EYICPQCSLA KYKPPLPAP
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.