CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12701	Soybean	mitochondrion, nucleus, vacuole	92.62	92.74
Os09t0434000-01	Rice	cytosol	8.29	69.57
VIT_11s0016g00370.t01	Wine grape	cytosol	66.45	69.32
AT3G43240.1	Thale cress	cytosol, nucleus, vacuole	62.31	64.39
CDY12335	Canola	nucleus	61.4	63.97
Bra034957.1-P	Field mustard	nucleus	61.27	63.83
KRH06271	Soybean	nucleus	59.97	59.21
KRH47705	Soybean	nucleus	59.59	59.05
Zm00001d020593_P002	Maize	nucleus, plastid	58.16	58.46
KXG35687	Sorghum	nucleus	57.9	58.13
HORVU5Hr1G063000.2	Barley	plastid	57.9	57.98
TraesCS5B01G214600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	58.03	57.44
GSMUA_Achr3P05790_001	Banana	nucleus	57.25	57.33
TraesCS5A01G216100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	57.9	57.31
TraesCS5D01G224100.2	Wheat	cytosol, mitochondrion, nucleus, plastid	57.9	57.31
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	57.25	57.11
Zm00001d005794_P009	Maize	nucleus, plastid	57.38	56.87
GSMUA_Achr11P...	Banana	nucleus	52.46	55.79
KXG25261	Sorghum	nucleus	53.5	55.14
Zm00001d032096_P005	Maize	cytosol, nucleus, vacuole	53.11	54.74
Os09t0434100-01	Rice	plastid	20.6	53.9
Os08t0451400-01	Rice	nucleus, plastid	48.06	48.75
Os08t0451700-03	Rice	plastid	29.02	48.28
KXG38052	Sorghum	cytosol, extracellular, nucleus	4.27	41.25
Os08t0361000-01	Rice	mitochondrion, plastid	10.1	40.41
Os08t0451500-01	Rice	mitochondrion	7.77	36.14

Protein Annotations

Gene3D:1.10.150.60	EntrezGene:100808357	MapMan:15.5.25	Gene3D:3.30.40.10	UniProt:A0A0R0I554	EMBL:ACUP02005470
InterPro:ARID_dom	InterPro:ARID_dom_sf	EnsemblPlantsGene:GLYMA_09G074300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016020
GO:GO:0016021	GO:GO:0046872	InterPro:IPR001606	InterPro:IPR013083	InterPro:IPR036431	EnsemblPlants:KRH37566
ProteinID:KRH37566	ProteinID:KRH37566.1	PFAM:PF01388	PFscan:PS51011	PANTHER:PTHR22970	PANTHER:PTHR22970:SF40
SMART:SM01014	SUPFAM:SSF46774	SUPFAM:SSF57903	TMHMM:TMhelix	UniParc:UPI0003DE8650	InterPro:Znf_FYVE_PHD
InterPro:Znf_RING/FYVE/PHD	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:7993377..8001981

Molecular Weight (calculated)

85453.9 Da

IEP (calculated)

7.752

GRAVY (calculated)

-0.300

Length

772 amino acids

Sequence
(BLAST)

001: MTTTINLLSF SLTPLFYFLW VLLYQKGVSR HCSLLAVLSG KSRDIKQKQK QGNASEDQFP YPFPELSSSG RLEVKVLIEP TADELGLALE QLQPDFVYLQ
101: GQQLEDRGEI GPLGWEDFDL SVPEALCGLF SSKLPNTVYL ETPKGEKLAE ALRSKGVPYT IYWKNDFSKY AASHFRHSLF SVAQSTSSHT WDAFQLALAS
201: FRLYCIHNNV LPSNCHKGAG KLGPQILGVP PNIDVSPCVA DMKEEEEDSP ETISAVKIYD DDVNMRFLIC GVPCTLDACL LGSLEDGLNA LLFAEIRGCK
301: LHNRTSATPP PLQAGTFSRG VVTMRCDIST CSSAHISLLV SGSADTCFND QLLENHIKKE LIEKSQLVQA FPNHEQSKAP SSEPRRSASV ACGSSVFEVC
401: MQVPAWASQV LRQLAPNLSY RSLVMLGIAS IQGLPVASFN KDDAERLLFF CTRQEKENCP NDHVFSGIPS WLKPPSTSRK RSEPCSSSKS INDSGRGVEA
501: IGSHRQKFNL ASMRPIPHSN RHKILPFSGL SEGTRYDGDH GKSNLPLAPI KHNVSGPTSV TNRKSVSNSF QAHQIISLNP LPMKKHGCDR APIRACSEEE
601: FLRDVMQFLI LRGHNRLIPP GGLAEFPDAI LNAKRLDLFN LYREVVSRGG FHVGNGINWK GQVFSKMRNH TMTNRMTGVG NTLKRHYETY LLEYELSHDD
701: VDGECCLMCH SSAAGDWVNC GICGEWAHFG CDRRQGLGAF KDYAKTDGLE YVCPRCSALK FSKKSQKTAN GF

Best Arabidopsis Sequence Match ( AT3G43240.1 )
(BLAST)

001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP

Arabidopsis Description

ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [cytosol,nucleus,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.