Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38052 | Sorghum | cytosol, extracellular, nucleus | 9.75 | 91.25 |
| Zm00001d032096_P005 | Maize | cytosol, nucleus, vacuole | 88.38 | 88.38 |
| KXG35687 | Sorghum | nucleus | 72.76 | 70.87 |
| Os08t0451700-03 | Rice | plastid | 38.85 | 62.72 |
| Os08t0451400-01 | Rice | nucleus, plastid | 61.68 | 60.71 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 59.28 | 60.0 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 61.68 | 59.92 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 60.21 | 58.27 |
| GSMUA_Achr11P... | Banana | nucleus | 56.34 | 58.13 |
| VIT_09s0002g00430.t01 | Wine grape | nucleus | 57.81 | 55.94 |
| Bra034957.1-P | Field mustard | nucleus | 54.07 | 54.66 |
| CDY12335 | Canola | nucleus | 54.07 | 54.66 |
| PGSC0003DMT400074246 | Potato | cytosol, mitochondrion, nucleus, vacuole | 55.94 | 54.42 |
| Solyc12g049570.1.1 | Tomato | nucleus | 55.81 | 54.22 |
| AT3G43240.1 | Thale cress | cytosol, nucleus, vacuole | 53.94 | 54.08 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 55.14 | 53.5 |
| KRH06271 | Soybean | nucleus | 55.27 | 52.94 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 54.47 | 52.92 |
| Os08t0451500-01 | Rice | mitochondrion | 11.62 | 52.41 |
| KRH47705 | Soybean | nucleus | 54.34 | 52.25 |
Protein Annotations
| Gene3D:1.10.150.60 | MapMan:15.5.25 | Gene3D:3.30.40.10 | UniProt:A0A1B6PHU7 | InterPro:ARID_dom | InterPro:ARID_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR001606 | InterPro:IPR013083 | InterPro:IPR036431 |
| EnsemblPlants:KXG25261 | ProteinID:KXG25261 | ProteinID:KXG25261.1 | PFAM:PF01388 | PFscan:PS51011 | PANTHER:PTHR22970 |
| PANTHER:PTHR22970:SF1 | SMART:SM01014 | EnsemblPlantsGene:SORBI_3007G146900 | SUPFAM:SSF46774 | SUPFAM:SSF57903 | UniParc:UPI00081AB807 |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:57708570..57717596
Molecular Weight (calculated)
82987.5 Da
IEP (calculated)
7.650
GRAVY (calculated)
-0.277
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQVQNTGRN CTLLAVLCGE IAEKRQTPAP LAPDTKRVRM SYPFPELASS GRLEVHTLIN PTLEQFREAQ QAVHPVFLYL QGQQQENEKE IGTLVWGDTD
101: LSDPQMFVSL ITPPFPTMVY LEVPIGEKLA QSLHSKGIPY VVYWRNSFSS YTASHFRHAL MSVIESSCSH TWDAFQLAHA SFRLYCVRNN YVQSVKLGPC
201: LLGDAPKINV IPAGNEVNKE EGCSEGFPPI RIYDEDVNMK FLVCGAPCTL DACLLGALED GLTALLNIEI RASKLQSRSS APPPLQAENL PHGVVTMRCD
301: ISTCSSAHVS FLVSASAQTC FDDKLLESRI KNEIIEKRQL VRALSNTEDN KPSYEPLPSM CVACGASTFE VWITLPKWAA QVLKQLAPEI CYRSLVALGI
401: AWVNGTPVSS FDRQDADRLL FFCSNQCKDK AIQNVSYAHL SSWSASLTKD RTTGSIESKQ MSFGAKGVGG DNKMSLSSLK PRLKPATMRP IPHSRKQQMH
501: PFMGFAQSIH DASPVKPSLP APPVKDNTVP VIKVTQRKSS SGSPSSSSRV QPSIPLNPLP MKKHECNRLP INICSEEDFL KDVMQFLLQR GHDRLVPQGG
601: PAEFPDAVLN SKRLDLYNLY KEVVYRGGFH VGNGINWKGQ VFSKMRNHTV TNKMTGVGNT LKRHYETYLL EYELAHDDIE VECCLICHSS DLGDWVNCGV
701: CGEWAHLGCD RRQGLGNFKD YSKTGGLEYI CPHCSHAKSP LPVQVGNDS
101: LSDPQMFVSL ITPPFPTMVY LEVPIGEKLA QSLHSKGIPY VVYWRNSFSS YTASHFRHAL MSVIESSCSH TWDAFQLAHA SFRLYCVRNN YVQSVKLGPC
201: LLGDAPKINV IPAGNEVNKE EGCSEGFPPI RIYDEDVNMK FLVCGAPCTL DACLLGALED GLTALLNIEI RASKLQSRSS APPPLQAENL PHGVVTMRCD
301: ISTCSSAHVS FLVSASAQTC FDDKLLESRI KNEIIEKRQL VRALSNTEDN KPSYEPLPSM CVACGASTFE VWITLPKWAA QVLKQLAPEI CYRSLVALGI
401: AWVNGTPVSS FDRQDADRLL FFCSNQCKDK AIQNVSYAHL SSWSASLTKD RTTGSIESKQ MSFGAKGVGG DNKMSLSSLK PRLKPATMRP IPHSRKQQMH
501: PFMGFAQSIH DASPVKPSLP APPVKDNTVP VIKVTQRKSS SGSPSSSSRV QPSIPLNPLP MKKHECNRLP INICSEEDFL KDVMQFLLQR GHDRLVPQGG
601: PAEFPDAVLN SKRLDLYNLY KEVVYRGGFH VGNGINWKGQ VFSKMRNHTV TNKMTGVGNT LKRHYETYLL EYELAHDDIE VECCLICHSS DLGDWVNCGV
701: CGEWAHLGCD RRQGLGNFKD YSKTGGLEYI CPHCSHAKSP LPVQVGNDS
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.