Factsheet for Os08t0451400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0434000-01	Rice	cytosol	9.99	82.61
Os09t0434100-01	Rice	plastid	24.7	63.73
KXG25261	Sorghum	nucleus	60.71	61.68
Zm00001d032096_P005	Maize	cytosol, nucleus, vacuole	60.58	61.55
VIT_11s0016g00370.t01	Wine grape	cytosol	50.99	52.43
Os08t0451700-03	Rice	plastid	30.22	49.57
Os08t0451500-01	Rice	mitochondrion	10.78	49.4
VIT_09s0002g00430.t01	Wine grape	nucleus	50.2	49.35
Solyc12g049570.1.1	Tomato	nucleus	49.15	48.51
PGSC0003DMT400074246	Potato	cytosol, mitochondrion, nucleus, vacuole	49.01	48.44
Os08t0361000-01	Rice	mitochondrion, plastid	12.22	48.19
KRH37566	Soybean	endoplasmic reticulum, golgi	48.75	48.06
CDY12335	Canola	nucleus	46.78	48.04
Bra034957.1-P	Field mustard	nucleus	46.65	47.91
AT3G43240.1	Thale cress	cytosol, nucleus, vacuole	46.52	47.39
KRH12701	Soybean	mitochondrion, nucleus, vacuole	47.96	47.34
KRH06271	Soybean	nucleus	47.96	46.68
KRH47705	Soybean	nucleus	47.17	46.08
KXG38052	Sorghum	cytosol, extracellular, nucleus	1.05	10.0

Protein Annotations

Gene3D:1.10.150.60	MapMan:15.5.25	Gene3D:3.30.40.10	EntrezGene:4345728	InterPro:ARID_dom	InterPro:ARID_dom_sf
ProteinID:BAF23860.1	ProteinID:BAT05705.1	ProteinID:EEE68794.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046872
InterPro:IPR001606	InterPro:IPR013083	InterPro:IPR036431	EnsemblPlantsGene:Os08g0451400	EnsemblPlants:Os08t0451400-01	PFAM:PF01388
PFscan:PS51011	PANTHER:PTHR22970	PANTHER:PTHR22970:SF1	UniProt:Q0J5A5	SMART:SM01014	SUPFAM:SSF46774
SUPFAM:SSF57903	UniParc:UPI0000DD954B	RefSeq:XP_015650565.1	RefSeq:XP_015650567.1	RefSeq:XP_015650568.1	RefSeq:XP_015650569.1
RefSeq:XP_015650570.1	RefSeq:XP_015650571.1	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

AT-rich Interaction Domain-containing protein 4AT-rich interaction region domain containing protein. (Os08t0451400-01);Hypothetical conserved gene. (Os08t0451400-02);Similar to ARID/BRIGHT DNA-binding domain-containing protein. (Os08t0451400-03)

Coordinates

chr8:-:22038935..22048676

Molecular Weight (calculated)

83908.0 Da

IEP (calculated)

8.079

GRAVY (calculated)

-0.226

Length

761 amino acids

Sequence
(BLAST)

001: MAQIQSSSLV NCTLLAVLCG KVTDKQQKPP GLVPEVKRPR LSYPFPELIS SGRLEVHTLI NPTVDQFRKA QQAVQPNLMY LQGQQLENEE EIGTLVWGDA
101: DVSDPQIFSS LISPPFPTIV YLEVPAGEKL AQSLQLKGIP YVLYWRNSFS SYAASHFRQA LISVVQSSCS HTWDAFQLAQ ASFRLYCARN NDAQSVKLGP
201: RLLGDAPKIN IFLPENEMVE EEGSSEHFPA IKIYDEDVNM KLLICGAPCI LDASLLGSLE DGLNALLNIE IRGCRLQNRV SAAPPPLHAE TLPHGVVTMR
301: CDITTCSSSH VSLLVSGSPQ TCFDDKLLEN HIKKEIVEKG QLVRAVLVRE DDKPSSVEPL TSISVASGAS TFEVWMTLPK WAGQVLKYLA PEISYKSLVP
401: LGIACVNGTP VSSFDRQDVD RLLFFCKNEA IVNGLYSHLP RWSASLVKDR LKGTPESKSS TFSANGVGEY QKHPMKGTSL VVKPKLKSAK MRPIPHSSKR
501: QMHPFVGIPP SFIHDASQVK PSLPAPPVRH NALPVAPTTQ RKLSSGTSRV EPAVPLNPLP MKKHGCDRLP IGICSEEDFL KDVMQFLLQR GHTRLVPQGG
601: LAEFPDAVLN AKRLDLYNLY KEVVSRGGFY VGNGINWKGQ VFSKMSNHTV TNKMTGVGNT LKRHYETYLL EYELSHDDVG GECCLLCHSS APGDWVNCGL
701: CGEWAHFGCD RRQGLGTFKD YAKTDGLEYI CPHCSLANYK KKPPPPESAN GFRIASAQRN I

Best Arabidopsis Sequence Match ( AT3G43240.1 )
(BLAST)

001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP

Arabidopsis Description

ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.