Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0451400-01 | Rice | nucleus, plastid | 82.61 | 9.99 |
| GSMUA_Achr3P05790_001 | Banana | nucleus | 81.52 | 9.73 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 78.26 | 9.3 |
| KRH06271 | Soybean | nucleus | 77.17 | 9.08 |
| VIT_11s0016g00370.t01 | Wine grape | cytosol | 72.83 | 9.05 |
| KRH47705 | Soybean | nucleus | 76.09 | 8.99 |
| GSMUA_Achr11P... | Banana | nucleus | 68.48 | 8.68 |
| VIT_09s0002g00430.t01 | Wine grape | nucleus | 71.74 | 8.53 |
| KRH37566 | Soybean | endoplasmic reticulum, golgi | 69.57 | 8.29 |
| CDY12335 | Canola | nucleus | 66.3 | 8.23 |
| Bra034957.1-P | Field mustard | nucleus | 66.3 | 8.23 |
| PGSC0003DMT400074246 | Potato | cytosol, mitochondrion, nucleus, vacuole | 68.48 | 8.18 |
| KRH12701 | Soybean | mitochondrion, nucleus, vacuole | 68.48 | 8.17 |
| Solyc12g049570.1.1 | Tomato | nucleus | 68.48 | 8.17 |
| AT3G43240.1 | Thale cress | cytosol, nucleus, vacuole | 66.3 | 8.17 |
| Os09t0434100-01 | Rice | plastid | 2.17 | 0.68 |
| Os08t0361000-01 | Rice | mitochondrion, plastid | 1.09 | 0.52 |
| Os08t0451500-01 | Rice | mitochondrion | 0.0 | 0.0 |
| Os08t0451700-03 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os09t0434000-01 | EnsemblPlantsGene:Os09g0434000 | Gene3D:3.30.40.10 | InterPro:IPR013083 | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| PANTHER:PTHR22970 | PANTHER:PTHR22970:SF40 | ProteinID:BAT08233.1 | SUPFAM:SSF57903 | UniParc:UPI0000DD9739 | UniProt:A0A0P0XN21 |
| MapMan:15.5.25 | : | : | : | : | : |
Description
AT-rich Interaction Domain-containing protein 5Zinc finger, FYVE/PHD-type domain containing protein. (Os09t0434000-01)
Coordinates
chr9:-:15937013..15937693
Molecular Weight (calculated)
10109.8 Da
IEP (calculated)
6.064
GRAVY (calculated)
-0.474
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: EYELAHDDVD GECCLLCHSS APGDWVNCGL CGEWAHFGCD RRQGLGTFKD YAKTDGLEYI CPHCSLANYK KKPPPQKVAN GFANTVSVSR NV
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.