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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 3
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os09t0434000-01 Rice cytosol 9.73 81.52
GSMUA_Achr10P... Banana cytosol, mitochondrion 67.57 67.31
VIT_11s0016g00370.t01 Wine grape cytosol 63.68 66.35
KXG35687 Sorghum nucleus 65.63 65.8
Zm00001d020593_P002 Maize nucleus, plastid 65.37 65.62
GSMUA_Achr11P... Banana nucleus 61.09 64.88
TraesCS5B01G214600.2 Wheat cytosol, mitochondrion, nucleus, plastid 65.5 64.74
HORVU5Hr1G063000.2 Barley plastid 64.59 64.59
TraesCS5A01G216100.1 Wheat cytosol, mitochondrion, nucleus, plastid 65.24 64.49
Zm00001d005794_P009 Maize nucleus, plastid 65.11 64.44
TraesCS5D01G224100.2 Wheat cytosol, mitochondrion, nucleus, plastid 65.11 64.36
Zm00001d032096_P005 Maize cytosol, nucleus, vacuole 60.83 62.62
VIT_09s0002g00430.t01 Wine grape nucleus 62.26 62.02
KXG25261 Sorghum nucleus 59.92 61.68
Solyc12g049570.1.1 Tomato nucleus 60.83 60.83
PGSC0003DMT400074246 Potato cytosol, mitochondrion, nucleus, vacuole 60.7 60.78
CDY12335 Canola nucleus 56.81 59.11
Bra034957.1-P Field mustard nucleus 56.55 58.84
AT3G43240.1 Thale cress cytosol, nucleus, vacuole 56.68 58.5
KRH06271 Soybean nucleus 58.75 57.93
KRH47705 Soybean nucleus 58.37 57.77
KRH37566 Soybean endoplasmic reticulum, golgi 57.33 57.25
KRH12701 Soybean mitochondrion, nucleus, vacuole 56.55 56.55
KXG38052 Sorghum cytosol, extracellular, nucleus 5.71 55.0
Protein Annotations
Gene3D:1.10.150.60MapMan:15.5.25Gene3D:3.30.40.10InterPro:ARID_domInterPro:ARID_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr3G05790_001EnsemblPlants:GSMUA_Achr3P05790_001EnsemblPlants:GSMUA_Achr3T05790_001InterPro:IPR001606
InterPro:IPR013083InterPro:IPR036431UniProt:M0SC47PFAM:PF01388PFscan:PS51011PANTHER:PTHR22970
PANTHER:PTHR22970:SF40SMART:SM01014SUPFAM:SSF46774SUPFAM:SSF57903UniParc:UPI000295682DInterPro:Znf_FYVE_PHD
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
AT-rich interaction region, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G05790_001]
Coordinates
chr3:+:3884420..3893198
Molecular Weight (calculated)
85670.3 Da
IEP (calculated)
7.562
GRAVY (calculated)
-0.276
Length
771 amino acids
Sequence
(BLAST)
001: MSQPQGYGRE NCILLAVLCG QFADRRRGDA KNRPQYPFPE LVSSGRLEVQ TLINPTVDRF SEAQKLVQPN ILYFQGEQLE NEEQIGSLVW GGVDVSDSEM
101: LTSFISPPLP TIVYLEIPSG EKIAQAFHSK GVRYVIYWKS AFSSYAASYF RHALLSVVQS SCSHTWDAFQ LAHASFRLYC LRNNQVLSDS SNQKLRSKIE
201: PHLLGDSPKI NIPLPEKDLA EDGEEETDEG NGSLASVTIF DEDMDLRFLV CGLPCTLDAC LLSSLEDGLN ALLNIEIRGS KLQNRVSAAP PPLQAGNFSR
301: GVVTMRCDIT TCSSAHISLL VSGSAQTCFD DQLLECHIKS ALIEKTQLVH AVPNSDDKKS SWLNPLNSVS IACGAPVFEV CMRMPTWAAQ VLKHLAPEVT
401: YRSLVTLGIA SIRGTTVASF EKEDADRLLF FCRRQVKDFV SEETVVSCLP TWSSSLIKGR SMSGLESRPI ASDYVFVEHG MACKSAELSV KKRQRSNIAA
501: MRPIPHPRKH KLLPFYGVPP ADVNDGSQVQ NNVSQTPHVK HNSLPRAPAI QRKSTSGSLR AQQIIPLNPL PLKKHECNRP SIQVCSEEEF LKDVMQFLIL
601: RGHSRLVPQG GIQEFPDAIL NAKRLDLYNL YREVVSRGGF YVGNGINWKG QVFSKMRNHT ATNRMTGVGN TLKRHYETYL LEYELAHDDV DGECCLLCHS
701: SAPGDWVNCG LCGEWAHFGC DRRPGLGTFK DYAKTDGLEY ICPHCSLTSY KKKSQKMANG FSNTSNVSRH L
Best Arabidopsis Sequence Match ( AT3G43240.1 )
(BLAST)
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.