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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0361000-01 Rice mitochondrion, plastid 71.69 61.66
Os09t0434100-01 Rice plastid 53.01 29.83
Os08t0451700-03 Rice plastid 75.3 26.94
Zm00001d032096_P005 Maize cytosol, nucleus, vacuole 53.01 11.75
KXG25261 Sorghum nucleus 52.41 11.62
Os08t0451400-01 Rice nucleus, plastid 49.4 10.78
VIT_11s0016g00370.t01 Wine grape cytosol 36.75 8.24
KRH37566 Soybean endoplasmic reticulum, golgi 36.14 7.77
PGSC0003DMT400074246 Potato cytosol, mitochondrion, nucleus, vacuole 35.54 7.66
Solyc12g049570.1.1 Tomato nucleus 35.54 7.65
VIT_09s0002g00430.t01 Wine grape nucleus 35.54 7.62
KRH12701 Soybean mitochondrion, nucleus, vacuole 34.94 7.52
AT3G43240.1 Thale cress cytosol, nucleus, vacuole 32.53 7.23
CDY12335 Canola nucleus 31.33 7.02
Bra034957.1-P Field mustard nucleus 30.72 6.88
KRH47705 Soybean nucleus 31.33 6.68
KRH06271 Soybean nucleus 30.72 6.52
KXG38052 Sorghum cytosol, extracellular, nucleus 1.2 2.5
Os09t0434000-01 Rice cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Os08t0451500-01EnsemblPlantsGene:Os08g0451500PANTHER:PTHR22970PANTHER:PTHR22970:SF1ProteinID:BAT05708.1UniParc:UPI000393A8C4
UniProt:A0A0P0XGJ5MapMan:35.1::::
Description
Conserved hypothetical protein. (Os08t0451500-01)
Coordinates
chr8:-:22054033..22067025
Molecular Weight (calculated)
18635.9 Da
IEP (calculated)
8.502
GRAVY (calculated)
-0.082
Length
166 amino acids
Sequence
(BLAST)
001: FRACVRGLCR VQRLRICGVL CSTMPHFPSG SRVKCTMLAV LCGKVGKQRM PPDPVPESQR PRPSFPFPEL ISSGRLDVHT LINPTVDQFL EAQRALQPRF
101: MYFQGQQLDK EEEIGRLVWG DADVSDPQIF SSLICPPFPT IVYLEVPSGE KIAQSLQSKH LIFAIP
Best Arabidopsis Sequence Match ( AT3G43240.1 )
(BLAST)
001: MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST
101: PDALVTLFGS TLPTTVYLEL PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR LYCTSDNAVL PSNSNRKMNY
201: EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301: VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR
401: SLVVLGVASI QGLSVASFEK DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI NVAALRPIPH TRRHKMIPFS
501: GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601: VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF
701: GCDRRPGLGA FKDYAKTDGL EYVCPNCSVS NYRKKSQKTS NGGLLVP
Arabidopsis Description
ARID4AT-rich interactive domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ79]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.