Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63590 | Soybean | cytosol | 65.02 | 50.8 |
| KRH57107 | Soybean | cytosol | 44.86 | 35.74 |
| VIT_17s0000g08910.t01 | Wine grape | cytosol | 35.39 | 27.04 |
| CDY53953 | Canola | cytosol | 33.33 | 25.47 |
| KRH03250 | Soybean | cytosol | 26.75 | 25.29 |
| PGSC0003DMT400046630 | Potato | nucleus | 31.28 | 24.92 |
| Solyc03g112550.2.1 | Tomato | nucleus | 32.1 | 24.68 |
| CDY21814 | Canola | nucleus | 33.74 | 23.63 |
| Bra019533.1-P | Field mustard | nucleus | 33.33 | 23.48 |
| Solyc06g071600.2.1 | Tomato | cytosol | 30.04 | 23.25 |
| AT3G48210.1 | Thale cress | cytosol | 30.04 | 23.17 |
| PGSC0003DMT400069649 | Potato | cytosol, mitochondrion, nucleus, plastid | 30.04 | 23.17 |
| Zm00001d011781_P001 | Maize | plastid | 22.22 | 23.08 |
| GSMUA_Achr10P... | Banana | nucleus | 29.63 | 20.17 |
| CDY48156 | Canola | cytosol | 20.58 | 20.0 |
| TraesCS3D01G535200.1 | Wheat | mitochondrion, nucleus, plastid | 25.93 | 19.57 |
| TraesCS3B01G599500.1 | Wheat | cytosol, mitochondrion, nucleus | 25.51 | 19.5 |
| TraesCS3A01G529800.1 | Wheat | mitochondrion, nucleus, plastid | 25.51 | 19.25 |
| HORVU3Hr1G115810.9 | Barley | cytosol, mitochondrion, plastid | 24.69 | 18.63 |
| TraesCS1D01G031600.1 | Wheat | nucleus | 23.05 | 17.78 |
| Os05t0110700-01 | Rice | nucleus | 26.34 | 17.73 |
| OQU88270 | Sorghum | cytosol, nucleus, plastid | 20.99 | 17.23 |
| Os01t0973200-00 | Rice | cytosol | 23.87 | 16.81 |
| TraesCS1B01G037800.1 | Wheat | nucleus | 22.63 | 16.67 |
| Bra018074.1-P | Field mustard | cytosol, plastid | 11.11 | 16.46 |
| Zm00001d041956_P002 | Maize | nucleus | 20.99 | 16.35 |
| EES18884 | Sorghum | plastid | 19.34 | 14.97 |
| Zm00001d011068_P001 | Maize | plastid | 19.34 | 14.07 |
| HORVU1Hr1G004480.4 | Barley | mitochondrion | 21.4 | 12.04 |
Protein Annotations
| EMBL:ACUP02003514 | EnsemblPlants:KRH54356 | EnsemblPlantsGene:GLYMA_06G179900 | Gene3D:3.30.457.50 | InterPro:Spc25 | PANTHER:PTHR14281 |
| PFAM:PF08234 | ProteinID:KRH54356 | ProteinID:KRH54356.1 | UniParc:UPI0006EDE228 | UniProt:A0A0R0JSF3 | MapMan:13.3.3.2.2.3 |
Description
hypothetical protein
Coordinates
chr6:-:15263934..15268363
Molecular Weight (calculated)
27188.9 Da
IEP (calculated)
10.194
GRAVY (calculated)
-0.454
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKAAIDSV KGRIEDLKTS IPQQRTKNKE CATVVSQHRL GGHILVHNRI LGFHVEGGRG VKFTFKNINV DNPNEEFFFT IRLEDDIYTL LNCKPSVKDT
101: DEVIHELNKT NGLFKFVRTM RKKFQEAVAQ GSLSMTTNEH QESAFMSASA PVLSISTITE GNENQDEPIK GNAHLQKQVN RRRVKSPGSA SSVCQSPRLK
201: EMKRCGGCSP ARYLILMRHA GSCRALIANK LTCKLRHTQV LDV
101: DEVIHELNKT NGLFKFVRTM RKKFQEAVAQ GSLSMTTNEH QESAFMSASA PVLSISTITE GNENQDEPIK GNAHLQKQVN RRRVKSPGSA SSVCQSPRLK
201: EMKRCGGCSP ARYLILMRHA GSCRALIANK LTCKLRHTQV LDV
001: MEQISNIAGG DTTKETMASL GLICEKDIHE QRLKIDSFIA SPFRRSMNSL VERAQATAQS QVELMNLKAD LREAEDELVK VLAVKTRKEA RQMGIRDSIS
101: ATQSRIEVLR RNLQLQKSKK DDSVRIISQQ LQALSKSKDN AGKVTEDKAD IHEAISWYNH ALGFHVEAGH GVKFTFTNID AKRPTREFSF TVHYGNDIYT
201: LLDSDLQLDY INEMVQELNK TNDLFRFVRL MREQFLKSTL SELPTHSGQL QQETSAISAS APAISFSTDT NMSTPENKRS KVQVNRRQKR GSESPLLAPV
301: STSATRRSSR FKGKK
101: ATQSRIEVLR RNLQLQKSKK DDSVRIISQQ LQALSKSKDN AGKVTEDKAD IHEAISWYNH ALGFHVEAGH GVKFTFTNID AKRPTREFSF TVHYGNDIYT
201: LLDSDLQLDY INEMVQELNK TNDLFRFVRL MREQFLKSTL SELPTHSGQL QQETSAISAS APAISFSTDT NMSTPENKRS KVQVNRRQKR GSESPLLAPV
301: STSATRRSSR FKGKK
Arabidopsis Description
SPC25Kinetochore protein SPC25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93VK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.