Factsheet for HORVU1Hr1G004480.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G031600.1	Wheat	nucleus	45.37	62.22
TraesCS1B01G037800.1	Wheat	nucleus	40.74	53.33
Os05t0110700-01	Rice	nucleus	35.19	42.11
HORVU3Hr1G115810.9	Barley	cytosol, mitochondrion, plastid	27.78	37.27
Zm00001d011068_P001	Maize	plastid	25.46	32.93
GSMUA_Achr10P...	Banana	nucleus	25.93	31.37
EES18884	Sorghum	plastid	22.22	30.57
VIT_17s0000g08910.t01	Wine grape	cytosol	22.22	30.19
PGSC0003DMT400046630	Potato	nucleus	21.3	30.16
Solyc03g112550.2.1	Tomato	nucleus	21.06	28.8
Solyc06g071600.2.1	Tomato	cytosol	20.14	27.71
KRH63590	Soybean	cytosol	19.91	27.65
PGSC0003DMT400069649	Potato	cytosol, mitochondrion, nucleus, plastid	19.68	26.98
KRH57107	Soybean	cytosol	18.52	26.23
AT3G48210.1	Thale cress	cytosol	18.98	26.03
CDY53953	Canola	cytosol	18.29	24.84
CDY21814	Canola	nucleus	18.75	23.34
Bra019533.1-P	Field mustard	nucleus	18.06	22.61
CDY48156	Canola	cytosol	12.96	22.4
KRH03250	Soybean	cytosol	12.73	21.4
KRH54356	Soybean	cytosol	12.04	21.4
Bra018074.1-P	Field mustard	cytosol, plastid	7.18	18.9

Protein Annotations

EnsemblPlants:HORVU1Hr1G004480.4	EnsemblPlantsGene:HORVU1Hr1G004480	Gene3D:3.30.457.50	InterPro:Spc25	ncoils:Coil	PANTHER:PTHR14281
PANTHER:PTHR14281:SF1	PFAM:PF08234	SEG:seg	UniParc:UPI000B45FAA7	UniProt:A0A287EI44	MapMan:13.3.3.2.2.3

Description

No Description!

Coordinates

chrchr1H:+:9228111..9232111

Molecular Weight (calculated)

48213.1 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.569

Length

432 amino acids

Sequence
(BLAST)

001: RLAPRPPLLA LQWRSQQSRK LVTSATPIKS FCIRYWLSSP SPSPAAHARE ELEAGPEHPR SRMAEDMEAR RAACERRLDA FGDRIAALQS SIRASARQEL
101: EAGPEHPRPS MAEDMEAQRA ALERRFAASR DRFASFKSSI TRSGAHQVLS RVEDLAFIRV AEDLAGLKKK LLGLESDLGQ ALSLNFRRQL ECERLRESIS
201: AEDAEREQLI GQLTDQVDRR GRCATVISNA LEAVQALETK ADEDDTWRTD IQKALRWYQE FLGFQVITGG EGLKFVFDKV DLQSPEKEFS VSLKIDNDRY
301: ILLQCSPAVE DSEELMKDLN LSNNLAKFAR IIRQRFQAAA LAGDLPASPT VCSDASALPI SSPVIKSVDS RSKNDRDRSN PQSKNMKPLL PAKRQASALS
401: AASPSSVRRS PRFVGKDVVQ NLSRSHQHKT GR

Best Arabidopsis Sequence Match ( AT3G48210.1 )
(BLAST)

001: MEQISNIAGG DTTKETMASL GLICEKDIHE QRLKIDSFIA SPFRRSMNSL VERAQATAQS QVELMNLKAD LREAEDELVK VLAVKTRKEA RQMGIRDSIS
101: ATQSRIEVLR RNLQLQKSKK DDSVRIISQQ LQALSKSKDN AGKVTEDKAD IHEAISWYNH ALGFHVEAGH GVKFTFTNID AKRPTREFSF TVHYGNDIYT
201: LLDSDLQLDY INEMVQELNK TNDLFRFVRL MREQFLKSTL SELPTHSGQL QQETSAISAS APAISFSTDT NMSTPENKRS KVQVNRRQKR GSESPLLAPV
301: STSATRRSSR FKGKK

Arabidopsis Description

SPC25Kinetochore protein SPC25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93VK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.