Factsheet for HORVU3Hr1G115810.9

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
MultiLoc:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G535200.1	Wheat	mitochondrion, nucleus, plastid	80.43	80.43
TraesCS3A01G529800.1	Wheat	mitochondrion, nucleus, plastid	80.43	80.43
TraesCS3B01G599500.1	Wheat	cytosol, mitochondrion, nucleus	78.88	79.87
Os01t0973200-00	Rice	cytosol	57.45	53.62
OQU88270	Sorghum	cytosol, nucleus, plastid	43.48	47.3
Zm00001d011781_P001	Maize	plastid	33.85	46.58
Zm00001d041956_P002	Maize	nucleus	42.24	43.59
GSMUA_Achr10P...	Banana	nucleus	37.58	33.89
PGSC0003DMT400046630	Potato	nucleus	31.99	33.77
Solyc03g112550.2.1	Tomato	nucleus	32.61	33.23
PGSC0003DMT400069649	Potato	cytosol, mitochondrion, nucleus, plastid	31.37	32.06
Solyc06g071600.2.1	Tomato	cytosol	30.75	31.53
VIT_17s0000g08910.t01	Wine grape	cytosol	30.75	31.13
KRH57107	Soybean	cytosol	27.33	28.85
CDY53953	Canola	cytosol	28.26	28.62
AT3G48210.1	Thale cress	cytosol	27.33	27.94
HORVU1Hr1G004480.4	Barley	mitochondrion	37.27	27.78
KRH63590	Soybean	cytosol	25.47	26.37
Bra019533.1-P	Field mustard	nucleus	27.95	26.09
CDY21814	Canola	nucleus	27.64	25.65
KRH54356	Soybean	cytosol	18.63	24.69
CDY48156	Canola	cytosol	18.94	24.4
KRH03250	Soybean	cytosol	18.32	22.96
Bra018074.1-P	Field mustard	cytosol, plastid	10.25	20.12

Protein Annotations

EnsemblPlants:HORVU3Hr1G115810.9	EnsemblPlantsGene:HORVU3Hr1G115810	Gene3D:3.30.457.50	InterPro:Spc25	ncoils:Coil	PANTHER:PTHR14281
PANTHER:PTHR14281:SF1	PFAM:PF08234	SEG:seg	UniParc:UPI000B46495B	UniProt:A0A287MT91	MapMan:13.3.3.2.2.3

Description

No Description!

Coordinates

chrchr3H:-:694103929..694106734

Molecular Weight (calculated)

35094.4 Da

IEP (calculated)

8.599

GRAVY (calculated)

-0.436

Length

322 amino acids

Sequence
(BLAST)

001: MEGDRAGGPA AADLSRDMAA ARAACERRIA QGRERIAAAA SAFRGDILSA RSLASGSVAH RDKLDSLKDQ LRVLQAALAE ALSTQLKKES ECELTRESIS
101: NATATNEQLR SLVVEQRARR DEFAKVIAHQ REAIEALEAN VDVVGKKNLD EAIMWYNKFL GFRVIAGEGV TFVFNKVDKQ RPDDEYSFCI KVNNDEYSLI
201: QCTPLIKDTE ELVKDLNRTN DLSKFVKIMR ARFQAAAIKG VHPATSLCSD TSSTTMSSPP VTSVDTTSEG TTNQSHSRSR FKNQDMCAER GAPPRSIASP
301: LMSGSSTRRS PRLAAAATGS IH

Best Arabidopsis Sequence Match ( AT3G48210.1 )
(BLAST)

001: MEQISNIAGG DTTKETMASL GLICEKDIHE QRLKIDSFIA SPFRRSMNSL VERAQATAQS QVELMNLKAD LREAEDELVK VLAVKTRKEA RQMGIRDSIS
101: ATQSRIEVLR RNLQLQKSKK DDSVRIISQQ LQALSKSKDN AGKVTEDKAD IHEAISWYNH ALGFHVEAGH GVKFTFTNID AKRPTREFSF TVHYGNDIYT
201: LLDSDLQLDY INEMVQELNK TNDLFRFVRL MREQFLKSTL SELPTHSGQL QQETSAISAS APAISFSTDT NMSTPENKRS KVQVNRRQKR GSESPLLAPV
301: STSATRRSSR FKGKK

Arabidopsis Description

SPC25Kinetochore protein SPC25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93VK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.