Factsheet for Os01t0973200-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G599500.1	Wheat	cytosol, mitochondrion, nucleus	57.97	62.89
TraesCS3D01G535200.1	Wheat	mitochondrion, nucleus, plastid	58.55	62.73
TraesCS3A01G529800.1	Wheat	mitochondrion, nucleus, plastid	58.26	62.42
HORVU3Hr1G115810.9	Barley	cytosol, mitochondrion, plastid	53.62	57.45
Zm00001d011781_P001	Maize	plastid	35.65	52.56
OQU88270	Sorghum	cytosol, nucleus, plastid	44.93	52.36
Zm00001d041956_P002	Maize	nucleus	45.8	50.64
Os05t0110700-01	Rice	nucleus	46.38	44.32
GSMUA_Achr10P...	Banana	nucleus	36.52	35.29
PGSC0003DMT400069649	Potato	cytosol, mitochondrion, nucleus, plastid	29.86	32.7
PGSC0003DMT400046630	Potato	nucleus	28.7	32.46
Solyc03g112550.2.1	Tomato	nucleus	28.99	31.65
Solyc06g071600.2.1	Tomato	cytosol	28.12	30.89
VIT_17s0000g08910.t01	Wine grape	cytosol	28.12	30.5
KRH57107	Soybean	cytosol	25.22	28.52
CDY53953	Canola	cytosol	24.06	26.1
KRH63590	Soybean	cytosol	22.61	25.08
KRH03250	Soybean	cytosol	18.55	24.9
AT3G48210.1	Thale cress	cytosol	22.32	24.44
CDY48156	Canola	cytosol	17.39	24.0
KRH54356	Soybean	cytosol	16.81	23.87
CDY21814	Canola	nucleus	23.77	23.63
Bra019533.1-P	Field mustard	nucleus	23.48	23.48
Bra018074.1-P	Field mustard	cytosol, plastid	9.28	19.51

Protein Annotations

EnsemblPlants:Os01t0973200-00	EnsemblPlantsGene:Os01g0973200	Gene3D:3.30.457.50	InterPro:Spc25	ncoils:Coil	PANTHER:PTHR14281
PANTHER:PTHR14281:SF1	PFAM:PF08234	ProteinID:BAS76443.1	SEG:seg	UniParc:UPI000393AE62	UniProt:A0A0P0VDD4
MapMan:13.3.3.2.2.3	:	:	:	:	:

Description

Hypothetical conserved gene. (Os01t0973200-00)

Coordinates

chr1:-:42967465..42970167

Molecular Weight (calculated)

38143.0 Da

IEP (calculated)

9.240

GRAVY (calculated)

-0.460

Length

345 amino acids

Sequence
(BLAST)

001: MEGGGGGGGG AIELRRRMAA QCLAFERQIA DGRERTKAAA SAFSAALLSA RSLSNHTISQ REKSNQLKDQ LRKLEADFAQ ALSIQGSNKT KYDLTGQSIT
101: NAIATNDQLS CLVTDKRASR DEYANVISSQ LEAIEALEAK TDAAGKKNLD EAFMWYKKFL GFQVVGGEGV KFVFSKIDIQ NPDNEYSFCI KLNKDRYNLL
201: QCTPFLKDSE ELVKDLNCSN DLFKFVRIMR ERFQAAAING FLPASSLCPD MSSSITDSSP PALSIDTGRE STTTTSQSHS RSRAKNQDNP TKRGARPSNL
301: LSSTRRSPRV AVSALYHPLR HNFSWLLIFT WCLFCSQAAD ATNRY

Best Arabidopsis Sequence Match ( AT3G48210.1 )
(BLAST)

001: MEQISNIAGG DTTKETMASL GLICEKDIHE QRLKIDSFIA SPFRRSMNSL VERAQATAQS QVELMNLKAD LREAEDELVK VLAVKTRKEA RQMGIRDSIS
101: ATQSRIEVLR RNLQLQKSKK DDSVRIISQQ LQALSKSKDN AGKVTEDKAD IHEAISWYNH ALGFHVEAGH GVKFTFTNID AKRPTREFSF TVHYGNDIYT
201: LLDSDLQLDY INEMVQELNK TNDLFRFVRL MREQFLKSTL SELPTHSGQL QQETSAISAS APAISFSTDT NMSTPENKRS KVQVNRRQKR GSESPLLAPV
301: STSATRRSSR FKGKK

Arabidopsis Description

SPC25Kinetochore protein SPC25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93VK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.