Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G396100.1 | Wheat | cytosol | 46.75 | 60.77 |
| TraesCS1A01G375700.1 | Wheat | cytosol | 46.75 | 60.77 |
| TraesCS1D01G383000.1 | Wheat | cytosol | 46.75 | 60.77 |
| TraesCS5B01G230300.1 | Wheat | cytosol | 41.42 | 56.0 |
| TraesCS5A01G232000.1 | Wheat | cytosol | 41.42 | 56.0 |
| Zm00001d020659_P001 | Maize | mitochondrion | 45.56 | 55.4 |
| TraesCS5D01G236000.1 | Wheat | cytosol | 40.24 | 54.4 |
| GSMUA_Achr2P20240_001 | Banana | nucleus | 37.28 | 50.0 |
| Solyc01g086860.2.1 | Tomato | nucleus | 29.59 | 50.0 |
| PGSC0003DMT400065007 | Potato | cytosol | 23.67 | 48.19 |
| VIT_12s0034g01110.t01 | Wine grape | nucleus | 30.18 | 47.66 |
| CDX92692 | Canola | cytosol, mitochondrion, nucleus | 30.18 | 47.22 |
| Solyc01g112370.2.1 | Tomato | nucleus | 28.99 | 46.23 |
| HORVU1Hr1G083390.16 | Barley | cytosol | 47.93 | 45.25 |
| KRH49908 | Soybean | nucleus | 28.99 | 44.55 |
| AT4G25315.1 | Thale cress | nucleus | 31.36 | 41.73 |
| Bra013885.1-P | Field mustard | cytosol, nucleus, plastid | 30.18 | 40.8 |
| CDY11069 | Canola | nucleus | 30.18 | 40.8 |
| Bra019176.1-P | Field mustard | nucleus | 30.18 | 40.8 |
| OQU89591 | Sorghum | cytosol, plastid | 47.93 | 40.1 |
| CDX89423 | Canola | cytosol, mitochondrion, nucleus | 29.59 | 40.0 |
| HORVU5Hr1G066790.2 | Barley | plastid | 37.28 | 39.62 |
| CDX94458 | Canola | extracellular | 30.18 | 31.88 |
Protein Annotations
| EnsemblPlants:Os09t0516800-01 | EnsemblPlantsGene:Os09g0516800 | EntrezGene:4347583 | InterPro:DUF3128 | PANTHER:PTHR28052 | PFAM:PF11326 |
| ProteinID:BAD33827.1 | ProteinID:BAF25589.1 | ProteinID:BAT08970.1 | RefSeq:XP_015612489.1 | RefSeq:XP_015612490.1 | SEG:seg |
| UniParc:UPI00003FF47B | UniProt:Q69MT8 | MapMan:35.2 | : | : | : |
Description
Protein of unknown function DUF3128 domain containing protein. (Os09t0516800-01)
Coordinates
chr9:+:20145624..20146472
Molecular Weight (calculated)
17987.2 Da
IEP (calculated)
7.857
GRAVY (calculated)
-0.413
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKKENPGG GGGGGPAPPR PDCVKCFDAL WFCYSPYYQL QNYYRHGEFD NCFGKWGDLV DCLWLKTRRA AEAEEILAAR EKARPHIWTY RTVDEASDNW
101: LRMYGHLVGL GGEDGGGGLV RVITPPSAAA VPRPATFPGL AAAATAAVPR PPPFTGAGAA PSPPKSGGS
101: LRMYGHLVGL GGEDGGGGLV RVITPPSAAA VPRPATFPGL AAAATAAVPR PPPFTGAGAA PSPPKSGGS
001: MSSENEDSSS VRRRVSCTKC FDALWFCYSP FYQMQQYYRV GKLDDCTKKF SDLFDCLSLK TKRASEAERI LEEQEKAAAE KHIWIMRTQE EAVSHWNETF
101: GHLEDPNS
101: GHLEDPNS
Arabidopsis Description
At4g25315 [Source:UniProtKB/TrEMBL;Acc:Q147K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.