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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plastid

Predictor Summary:
  • plastid 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020659_P001 Maize mitochondrion 47.52 69.06
TraesCS1B01G396100.1 Wheat cytosol 41.58 64.62
TraesCS5B01G230300.1 Wheat cytosol 39.6 64.0
TraesCS5A01G232000.1 Wheat cytosol 39.6 64.0
TraesCS1D01G383000.1 Wheat cytosol 40.59 63.08
TraesCS1A01G375700.1 Wheat cytosol 40.59 63.08
TraesCS5D01G236000.1 Wheat cytosol 38.61 62.4
Solyc01g086860.2.1 Tomato nucleus 28.71 58.0
GSMUA_Achr2P20240_001 Banana nucleus 34.16 54.76
VIT_12s0034g01110.t01 Wine grape nucleus 28.71 54.21
Solyc01g112370.2.1 Tomato nucleus 28.22 53.77
PGSC0003DMT400065007 Potato cytosol 21.78 53.01
CDX92692 Canola cytosol, mitochondrion, nucleus 27.23 50.93
KRH49908 Soybean nucleus 27.72 50.91
HORVU1Hr1G083390.16 Barley cytosol 42.57 48.04
Os09t0516800-01 Rice cytosol, mitochondrion, peroxisome 40.1 47.93
HORVU5Hr1G066790.2 Barley plastid 37.13 47.17
AT4G25315.1 Thale cress nucleus 27.72 44.09
CDY11069 Canola nucleus 26.73 43.2
Bra019176.1-P Field mustard nucleus 26.73 43.2
Bra013885.1-P Field mustard cytosol, nucleus, plastid 25.74 41.6
CDX89423 Canola cytosol, mitochondrion, nucleus 25.25 40.8
CDX94458 Canola extracellular 26.24 33.12
Protein Annotations
EnsemblPlants:OQU89591EnsemblPlantsGene:SORBI_3002G219800InterPro:DUF3128PANTHER:PTHR28052PFAM:PF11326ProteinID:OQU89591
ProteinID:OQU89591.1SEG:segUniParc:UPI0009DC88C6UniProt:A0A1W0W5H1MapMan:35.2:
Description
hypothetical protein
Coordinates
chr2:-:61118662..61122597
Molecular Weight (calculated)
23021.5 Da
IEP (calculated)
9.866
GRAVY (calculated)
-0.732
Length
202 amino acids
Sequence
(BLAST)
001: PAADLLCPLA APQPGVETSL SRAPPGPQRP RESRPAPARR PPSGVPVSPR PSLLSYFATR HLGRRRAPPG HQQGFMDKKE KPEATSSTPP PRRLDCIKCF
101: DMLWFCYSPF HQMQNYYRFG EFDNCFGKWA DLVDCLTLKT KRAAEVEEIL IAREKAAKPH IWTYRTVDEA SENWWRMYRH FVMLSGPLSG SARPRPKSDE
201: SQ
Best Arabidopsis Sequence Match ( AT4G25315.2 )
(BLAST)
001: MSSENEDSSS VRRRVSCTKC FDALWFCYSP FYQMQQYYRV GKLDDCTKKF SDLFDCLSLK TKRASEAERI LEEQEKAAAE KHIWIMRTQE EAVSHWNETF
101: GHLEDPNS
Arabidopsis Description
At4g25315 [Source:UniProtKB/TrEMBL;Acc:Q147K0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.