Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G396100.1 | Wheat | cytosol | 62.59 | 66.92 |
| TraesCS1D01G383000.1 | Wheat | cytosol | 61.15 | 65.38 |
| TraesCS1A01G375700.1 | Wheat | cytosol | 61.15 | 65.38 |
| TraesCS5B01G230300.1 | Wheat | cytosol | 57.55 | 64.0 |
| TraesCS5A01G232000.1 | Wheat | cytosol | 56.83 | 63.2 |
| TraesCS5D01G236000.1 | Wheat | cytosol | 55.4 | 61.6 |
| GSMUA_Achr2P20240_001 | Banana | nucleus | 49.64 | 54.76 |
| Solyc01g086860.2.1 | Tomato | nucleus | 38.13 | 53.0 |
| VIT_12s0034g01110.t01 | Wine grape | nucleus | 38.85 | 50.47 |
| Solyc01g112370.2.1 | Tomato | nucleus | 38.13 | 50.0 |
| KRH49908 | Soybean | nucleus | 38.85 | 49.09 |
| PGSC0003DMT400065007 | Potato | cytosol | 28.78 | 48.19 |
| HORVU1Hr1G083390.16 | Barley | cytosol | 61.87 | 48.04 |
| OQU89591 | Sorghum | cytosol, plastid | 69.06 | 47.52 |
| Os09t0516800-01 | Rice | cytosol, mitochondrion, peroxisome | 55.4 | 45.56 |
| CDX92692 | Canola | cytosol, mitochondrion, nucleus | 35.25 | 45.37 |
| HORVU5Hr1G066790.2 | Barley | plastid | 48.92 | 42.77 |
| AT4G25315.1 | Thale cress | nucleus | 38.13 | 41.73 |
| CDY11069 | Canola | nucleus | 36.69 | 40.8 |
| Bra019176.1-P | Field mustard | nucleus | 36.69 | 40.8 |
| Bra013885.1-P | Field mustard | cytosol, nucleus, plastid | 34.53 | 38.4 |
| CDX89423 | Canola | cytosol, mitochondrion, nucleus | 33.81 | 37.6 |
| CDX94458 | Canola | extracellular | 35.97 | 31.25 |
Protein Annotations
| EMBL:BT042353 | EnsemblPlants:Zm00001d020659_P001 | EnsemblPlants:Zm00001d020659_T001 | EnsemblPlantsGene:Zm00001d020659 | InterPro:DUF3128 | PANTHER:PTHR28052 |
| PFAM:PF11326 | ProteinID:ONM55340.1 | UniParc:UPI00017B7655 | UniProt:B4FZ15 | MapMan:35.2 | : |
Description
Expressed protein
Coordinates
chr7:-:126951943..126952362
Molecular Weight (calculated)
16272.7 Da
IEP (calculated)
8.107
GRAVY (calculated)
-0.460
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MCINLTLLAS YYAARIMDPK EKPNVSSSPP TPRLDCIKCF DMLWFCYSPF HQMQNYYRYG EFDTCFGKWG DLMGCLALKT KRKAEVEEIL IAREKAKPHI
101: WTYRTVDEAS ENWWRMYKHA VMMSPLPGSA QLPPRSDES
101: WTYRTVDEAS ENWWRMYKHA VMMSPLPGSA QLPPRSDES
001: MSSENEDSSS VRRRVSCTKC FDALWFCYSP FYQMQQYYRV GKLDDCTKKF SDLFDCLSLK TKRASEAERI LEEQEKAAAE KHIWIMRTQE EAVSHWNETF
101: GHLEDPNS
101: GHLEDPNS
Arabidopsis Description
At4g25315 [Source:UniProtKB/TrEMBL;Acc:Q147K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.