Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89423 Canola cytosol, mitochondrion, nucleus 99.2 99.2
Bra019176.1-P Field mustard nucleus 88.0 88.0
AT4G25315.1 Thale cress nucleus 84.8 83.46
CDX94458 Canola extracellular 96.8 75.62
Solyc01g086860.2.1 Tomato nucleus 48.0 60.0
Solyc01g112370.2.1 Tomato nucleus 47.2 55.66
PGSC0003DMT400065007 Potato cytosol 36.0 54.22
VIT_12s0034g01110.t01 Wine grape nucleus 46.4 54.21
KRH49908 Soybean nucleus 40.8 46.36
GSMUA_Achr2P20240_001 Banana nucleus 45.6 45.24
TraesCS1B01G396100.1 Wheat cytosol 40.0 38.46
TraesCS1A01G375700.1 Wheat cytosol 39.2 37.69
TraesCS1D01G383000.1 Wheat cytosol 39.2 37.69
TraesCS5A01G232000.1 Wheat cytosol 37.6 37.6
TraesCS5B01G230300.1 Wheat cytosol 37.6 37.6
TraesCS5D01G236000.1 Wheat cytosol 37.6 37.6
Zm00001d020659_P001 Maize mitochondrion 38.4 34.53
Os09t0516800-01 Rice cytosol, mitochondrion, peroxisome 40.8 30.18
HORVU5Hr1G066790.2 Barley plastid 35.2 27.67
HORVU1Hr1G083390.16 Barley cytosol 38.4 26.82
OQU89591 Sorghum cytosol, plastid 41.6 25.74
Protein Annotations
EnsemblPlants:Bra013885.1EnsemblPlants:Bra013885.1-PEnsemblPlantsGene:Bra013885InterPro:DUF3128PANTHER:PTHR28052PFAM:PF11326
UniParc:UPI0002546849UniProt:M4DBM5MapMan:35.2:::
Description
AT4G25315 (E=4e-059) | Expressed protein
Coordinates
chrA01:-:8238826..8239941
Molecular Weight (calculated)
14731.1 Da
IEP (calculated)
4.989
GRAVY (calculated)
-0.840
Length
125 amino acids
Sequence
(BLAST)
001: MSTEMEDSSA VRRRVSCTKY FDALWFCYWM SRCSNITSNG DETEQAPYYQ MQQYYRVGKL DDCTKKFSAL FDCLSLKTKS ASEAEKIMEE REKADAAKHI
101: WIMRTQEEAS SHWNETFGHL DDPNY
Best Arabidopsis Sequence Match ( AT4G25315.1 )
(BLAST)
001: MSSENEDSSS VRRRVSCTKC FDALWFCYWM SRWSNITSNG DDTGNDLAPF YQMQQYYRVG KLDDCTKKFS DLFDCLSLKT KRASEAERIL EEQEKAAAEK
101: HIWIMRTQEE AVSHWNETFG HLEDPNS
Arabidopsis Description
At4g25315 [Source:UniProtKB/TrEMBL;Acc:Q147K0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.