Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019176.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX92692 | Canola | cytosol, mitochondrion, nucleus | 76.8 | 88.89 |
| CDX89423 | Canola | cytosol, mitochondrion, nucleus | 88.8 | 88.8 |
| AT4G25315.1 | Thale cress | nucleus | 83.2 | 81.89 |
| CDX94458 | Canola | extracellular | 84.8 | 66.25 |
| Solyc01g086860.2.1 | Tomato | nucleus | 45.6 | 57.0 |
| VIT_12s0034g01110.t01 | Wine grape | nucleus | 47.2 | 55.14 |
| Solyc01g112370.2.1 | Tomato | nucleus | 44.8 | 52.83 |
| PGSC0003DMT400065007 | Potato | cytosol | 34.4 | 51.81 |
| KRH49908 | Soybean | nucleus | 40.8 | 46.36 |
| GSMUA_Achr2P20240_001 | Banana | nucleus | 45.6 | 45.24 |
| TraesCS1B01G396100.1 | Wheat | cytosol | 41.6 | 40.0 |
| TraesCS1A01G375700.1 | Wheat | cytosol | 40.0 | 38.46 |
| TraesCS1D01G383000.1 | Wheat | cytosol | 40.0 | 38.46 |
| TraesCS5A01G232000.1 | Wheat | cytosol | 37.6 | 37.6 |
| TraesCS5B01G230300.1 | Wheat | cytosol | 37.6 | 37.6 |
| TraesCS5D01G236000.1 | Wheat | cytosol | 36.8 | 36.8 |
| Zm00001d020659_P001 | Maize | mitochondrion | 40.8 | 36.69 |
| Os09t0516800-01 | Rice | cytosol, mitochondrion, peroxisome | 40.8 | 30.18 |
| HORVU5Hr1G066790.2 | Barley | plastid | 35.2 | 27.67 |
| HORVU1Hr1G083390.16 | Barley | cytosol | 39.2 | 27.37 |
| OQU89591 | Sorghum | cytosol, plastid | 43.2 | 26.73 |
Protein Annotations
| EnsemblPlants:CDY11069 | EnsemblPlantsGene:GSBRNA2T00049030001 | InterPro:DUF3128 | PANTHER:PTHR28052 | PFAM:PF11326 | ProteinID:CDY11069 |
| ProteinID:CDY11069.1 | UniParc:UPI00025410C9 | UniProt:A0A078FDR8 | MapMan:35.2 | : | : |
Description
BnaA03g47280DBnaA03g47280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDR8]
Coordinates
chrLK032008:-:887656..889306
Molecular Weight (calculated)
14607.9 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.782
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTEKDDSSA VRRRVSCTKC FDALWFCYWM SRWSNITSNV NGSAQAPFYQ MQQYYRVGKL DDCTKKFSDL FDCLSLKTKS SSEAEKIMEE QEKADAAKHI
101: WTMRTQVEAS SHWNETFGHL DDPNY
101: WTMRTQVEAS SHWNETFGHL DDPNY
001: MSSENEDSSS VRRRVSCTKC FDALWFCYWM SRWSNITSNG DDTGNDLAPF YQMQQYYRVG KLDDCTKKFS DLFDCLSLKT KRASEAERIL EEQEKAAAEK
101: HIWIMRTQEE AVSHWNETFG HLEDPNS
101: HIWIMRTQEE AVSHWNETFG HLEDPNS
Arabidopsis Description
At4g25315 [Source:UniProtKB/TrEMBL;Acc:Q147K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.