Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037178.1-P | Field mustard | cytosol, mitochondrion, nucleus | 90.91 | 90.0 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 90.91 | 90.0 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 88.89 | 88.0 |
| AT2G21220.1 | Thale cress | mitochondrion | 60.61 | 57.69 |
| AT4G38860.1 | Thale cress | mitochondrion | 60.61 | 57.14 |
| AT4G36110.1 | Thale cress | mitochondrion | 58.59 | 55.77 |
| AT1G75580.1 | Thale cress | mitochondrion | 60.61 | 55.56 |
| AT4G34760.1 | Thale cress | mitochondrion | 59.6 | 55.14 |
| AT2G16580.1 | Thale cress | mitochondrion | 58.59 | 53.7 |
| AT3G51200.1 | Thale cress | nucleus | 56.57 | 52.83 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 56.57 | 50.0 |
| AT1G19830.1 | Thale cress | mitochondrion | 57.58 | 48.72 |
| AT4G09530.1 | Thale cress | cytosol | 31.31 | 30.1 |
| AT2G37030.1 | Thale cress | cytosol | 34.34 | 27.42 |
| AT5G03310.1 | Thale cress | mitochondrion | 30.3 | 26.32 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 34.34 | 21.94 |
Protein Annotations
| ArrayExpress:AT5G66260 | EnsemblPlants:AT5G66260.1 | EnsemblPlantsGene:AT5G66260 | EntrezGene:836758 | GO:GO:0003674 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 |
| ProteinID:AED98192.1 | ProteinID:BAB10705.1 | RefSeq:AT5G66260 | RefSeq:AT5G66260-TAIR-G | RefSeq:NP_201427.1 | TAIR:AT5G66260 |
| TAIR:AT5G66260.1 | UniParc:UPI000009E780 | UniProt:Q9FH62 | MapMan:35.1 | : | : |
Description
Auxin-induced protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FH62]
Coordinates
chr5:+:26471224..26471786
Molecular Weight (calculated)
11094.4 Da
IEP (calculated)
9.379
GRAVY (calculated)
-0.164
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGVERGSGKG LKQMLKRCSS LGKKSSVDVN FNGVPKGHFV VYVGHSRSRH VIPISFLTHP IFQMLLQQSE EEFGFFQDNG LTIPCDEHFF RALISSINP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.