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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34993 Soybean nucleus, plastid 48.74 47.55
KRG91792 Soybean nucleus, plastid 48.24 46.15
Solyc06g065340.1.1 Tomato nucleus, plastid 43.72 38.84
Bra003902.1-P Field mustard nucleus, plastid 39.2 38.81
CDX68291 Canola nucleus, plastid 38.69 38.31
PGSC0003DMT400067168 Potato nucleus, plastid 43.72 38.16
AT1G22680.1 Thale cress plastid 35.18 37.84
PGSC0003DMT400036445 Potato plastid 37.19 37.37
CDY36668 Canola nucleus, plastid 37.69 36.76
Solyc11g018710.1.1 Tomato nucleus, plastid 36.18 36.55
Bra008000.1-P Field mustard nucleus, plastid 38.69 36.49
CDY03667 Canola nucleus, plastid 38.69 36.49
VIT_18s0075g00270.t01 Wine grape plastid 33.67 36.22
CDX96367 Canola nucleus, plastid 38.69 35.16
CDX72851 Canola nucleus, plastid 36.68 34.93
Bra016094.1-P Field mustard nucleus, plastid 38.19 34.7
AT1G71970.1 Thale cress plastid 37.69 33.33
CDX82197 Canola nucleus, plastid 34.17 33.01
Protein Annotations
ArrayExpress:VIT_18s0075g00250EMBL:FN594970EnsemblPlants:VIT_18s0075g00250.t01EnsemblPlantsGene:VIT_18s0075g00250EntrezGene:100266309EntrezGene:LOC100266309
PANTHER:PTHR33696PANTHER:PTHR33696:SF1ProteinID:CCB44924ProteinID:CCB44924.1RefSeq:XP_002263051RefSeq:XP_002263051.1
SEG:segTIGR:TC56845unigene:Vvi.7757UniParc:UPI0001985C83UniProt:F6GY88wikigene:100266309
wikigene:LOC100266309MapMan:35.2::::
Description
No Description!
Coordinates
chr18:-:21610740..21611586
Molecular Weight (calculated)
22225.0 Da
IEP (calculated)
10.354
GRAVY (calculated)
-0.798
Length
199 amino acids
Sequence
(BLAST)
001: MDSSTKIVPN ERDTKFPATN QLSSRRSQSF SSLSSCSSSL ESSFSGDSPT SPVTPARFSG IPFSWEKIPG IPKKQASRKK ENSPLSLLPL PPSTTPTPSK
101: RFNHQDQETS TIRKKNNISE SFRRDPFFAA FVECCKEDED QETSPNIWKS SKVPRNLSDR LGLINIYTSC KRTCTVSESI TLVPRSARSS YHILNRRSG
Best Arabidopsis Sequence Match ( AT1G22680.1 )
(BLAST)
001: MDTSPRTRIV PTRRSNSVKF SSTVNISTRR SLSSSSSNSL LFSGNSPATP LHPLGIPFSW EKLPGKPKEF SYHRKNESLS NLLPLPPHWS NHSPNTRCKK
101: NTSPAAMRDP FMAALVECSK GATTDGEHTG GESRKVLRKS RSIGLLNLYS SCRRACEVSE SIVYLPKSIA SYDHLHLSTR GRRRR
Arabidopsis Description
T22J18.15 [Source:UniProtKB/TrEMBL;Acc:O80553]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.