Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G71970.1 | Thale cress | plastid | 55.14 | 45.33 |
| KRH34993 | Soybean | nucleus, plastid | 40.54 | 36.76 |
| VIT_18s0075g00250.t01 | Wine grape | nucleus, plastid | 37.84 | 35.18 |
| KRG91792 | Soybean | nucleus, plastid | 39.46 | 35.1 |
| PGSC0003DMT400036445 | Potato | plastid | 37.3 | 34.85 |
| Solyc11g018710.1.1 | Tomato | nucleus, plastid | 34.59 | 32.49 |
| VIT_18s0075g00270.t01 | Wine grape | plastid | 30.27 | 30.27 |
| Solyc06g065340.1.1 | Tomato | nucleus, plastid | 35.68 | 29.46 |
| PGSC0003DMT400067168 | Potato | nucleus, plastid | 35.68 | 28.95 |
Protein Annotations
| ArrayExpress:AT1G22680 | EMBL:DQ132654 | EnsemblPlants:AT1G22680.1 | EnsemblPlantsGene:AT1G22680 | EntrezGene:838874 | GO:GO:0008150 |
| InterPro:DUF688 | PANTHER:PTHR33696 | PANTHER:PTHR33696:SF1 | PFAM:PF05097 | ProteinID:AAC25518.1 | ProteinID:AAX23756.1 |
| ProteinID:AEE30269.1 | RefSeq:AT1G22680 | RefSeq:AT1G22680-TAIR-G | RefSeq:NP_173682.1 | SEG:seg | TAIR:AT1G22680 |
| TAIR:AT1G22680.1 | Unigene:At.64840 | UniParc:UPI000009C5C6 | UniProt:O80553 | MapMan:35.2 | : |
Description
T22J18.15 [Source:UniProtKB/TrEMBL;Acc:O80553]
Coordinates
chr1:-:8024967..8026356
Molecular Weight (calculated)
20593.5 Da
IEP (calculated)
11.269
GRAVY (calculated)
-0.694
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSPRTRIV PTRRSNSVKF SSTVNISTRR SLSSSSSNSL LFSGNSPATP LHPLGIPFSW EKLPGKPKEF SYHRKNESLS NLLPLPPHWS NHSPNTRCKK
101: NTSPAAMRDP FMAALVECSK GATTDGEHTG GESRKVLRKS RSIGLLNLYS SCRRACEVSE SIVYLPKSIA SYDHLHLSTR GRRRR
101: NTSPAAMRDP FMAALVECSK GATTDGEHTG GESRKVLRKS RSIGLLNLYS SCRRACEVSE SIVYLPKSIA SYDHLHLSTR GRRRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.