Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66197 | Soybean | cytosol | 58.59 | 51.37 |
| KRH17687 | Soybean | nucleus | 57.03 | 50.0 |
| KRG99533 | Soybean | nucleus | 54.69 | 47.62 |
| KRH46588 | Soybean | nucleus | 53.91 | 46.62 |
| PGSC0003DMT400016876 | Potato | cytosol | 57.03 | 45.62 |
| Solyc06g083080.2.1 | Tomato | nucleus | 49.22 | 41.72 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 50.0 | 32.82 |
| AT5G48500.1 | Thale cress | cytosol | 39.06 | 29.94 |
| Bra037483.1-P | Field mustard | cytosol | 37.5 | 29.45 |
| CDX86302 | Canola | cytosol | 37.5 | 29.45 |
| CDX85342 | Canola | cytosol | 36.72 | 29.01 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 35.16 | 28.85 |
| Bra020695.1-P | Field mustard | cytosol | 36.72 | 28.66 |
| CDY48761 | Canola | cytosol | 36.72 | 28.66 |
| CDY68652 | Canola | cytosol | 35.94 | 28.22 |
| CDY00054 | Canola | cytosol | 32.81 | 26.09 |
| Bra036167.1-P | Field mustard | cytosol | 32.03 | 25.62 |
| CDY19944 | Canola | cytosol | 32.03 | 23.03 |
Protein Annotations
| ArrayExpress:VIT_00s0333g00060 | EMBL:FN596522 | EnsemblPlants:VIT_00s0333g00060.t01 | EnsemblPlantsGene:VIT_00s0333g00060 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0080167 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | ProteinID:CBI38316 | ProteinID:CBI38316.3 | SEG:seg |
| TIGR:TC52627 | unigene:Vvi.14238 | UniParc:UPI0001BE507B | UniProt:D7U6E7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:+:23809297..23811577
Molecular Weight (calculated)
14840.4 Da
IEP (calculated)
4.789
GRAVY (calculated)
-0.748
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEYKRSHVP AFGSWDCNDD LPFTQCFESA RQAGLLRYSY SEDRDLYVAG DLYQNDVMTP AMIVVPRRTT RDSYSDEKEE KNQGWVCDVK EPPSPIPTPR
101: RPFPKLLTKI CTRSLPLSFA TINLEERE
101: RPFPKLLTKI CTRSLPLSFA TINLEERE
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.