Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19944 | Canola | cytosol | 87.58 | 79.21 |
| AT5G48500.1 | Thale cress | cytosol | 72.05 | 69.46 |
| CDX86302 | Canola | cytosol | 68.94 | 68.1 |
| CDY68652 | Canola | cytosol | 68.94 | 68.1 |
| CDX85342 | Canola | cytosol | 68.32 | 67.9 |
| CDY48761 | Canola | cytosol | 68.94 | 67.68 |
| KRH17687 | Soybean | nucleus | 40.99 | 45.21 |
| KRH66197 | Soybean | cytosol | 37.89 | 41.78 |
| KRH46588 | Soybean | nucleus | 37.89 | 41.22 |
| Solyc06g083080.2.1 | Tomato | nucleus | 38.51 | 41.06 |
| KRG99533 | Soybean | nucleus | 37.27 | 40.82 |
| PGSC0003DMT400016876 | Potato | cytosol | 37.27 | 37.5 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 26.09 | 32.81 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 33.54 | 27.69 |
| CDY66670 | Canola | nucleus | 23.6 | 23.17 |
| CDY02635 | Canola | nucleus | 23.6 | 22.75 |
| CDY38505 | Canola | nucleus | 22.98 | 22.42 |
| CDY53249 | Canola | nucleus | 23.6 | 21.23 |
Protein Annotations
| EnsemblPlants:CDY00054 | EnsemblPlantsGene:GSBRNA2T00109541001 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | ProteinID:CDY00054 | ProteinID:CDY00054.1 |
| SEG:seg | UniParc:UPI0004EF22A8 | MapMan:35.2 | : | : | : |
Description
BnaC09g02470D
Coordinates
chrLK031916:-:487481..488450
Molecular Weight (calculated)
18289.4 Da
IEP (calculated)
8.132
GRAVY (calculated)
-0.859
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYEYCGGEY CRRGDAPAFG SGNWNDAVPF TQCFETATTQ QPAILHYAPY TQDRDLYLED DLYDNHHHHH LVSPAVIVLP RRRSRVGQKP KRDTSKEEHN
101: FKNEATSCPT PVEKRRMAAP KPVDEDLYKV SPQLLSAKST KKRGGGFGCI SRCFLPTSVR D
101: FKNEATSCPT PVEKRRMAAP KPVDEDLYKV SPQLLSAKST KKRGGGFGCI SRCFLPTSVR D
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.