Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 74.17 | 57.44 |
| KRH17687 | Soybean | nucleus | 52.32 | 54.11 |
| KRH46588 | Soybean | nucleus | 52.98 | 54.05 |
| KRG99533 | Soybean | nucleus | 52.32 | 53.74 |
| KRH66197 | Soybean | cytosol | 50.33 | 52.05 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 41.72 | 49.22 |
| AT5G48500.1 | Thale cress | cytosol | 45.7 | 41.32 |
| CDY48761 | Canola | cytosol | 43.71 | 40.24 |
| Bra020695.1-P | Field mustard | cytosol | 43.05 | 39.63 |
| Bra036167.1-P | Field mustard | cytosol | 41.72 | 39.38 |
| CDY68652 | Canola | cytosol | 42.38 | 39.26 |
| CDX86302 | Canola | cytosol | 42.38 | 39.26 |
| Bra037483.1-P | Field mustard | cytosol | 42.38 | 39.26 |
| CDX85342 | Canola | cytosol | 41.72 | 38.89 |
| CDY00054 | Canola | cytosol | 41.06 | 38.51 |
| Solyc04g050790.2.1 | Tomato | cytosol | 31.79 | 35.82 |
| CDY19944 | Canola | cytosol | 41.72 | 35.39 |
Protein Annotations
| EnsemblPlants:Solyc06g083080.2.1 | EnsemblPlantsGene:Solyc06g083080.2 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0080167 | PANTHER:PTHR33699 |
| PANTHER:PTHR33699:SF2 | UniParc:UPI0002765BE5 | UniProt:K4CAG3 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6:+:48631931..48633901
Molecular Weight (calculated)
17569.9 Da
IEP (calculated)
8.046
GRAVY (calculated)
-0.726
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNRYYMKR NQVPAFGSWD CNDNDFPIPF TECFESARQA GLIHYTYSQD SDLYVTGDLY QNHIVTPTMI VVPRRKKKGS YKEGRKEEWV MCDNCEKESP
101: RHVVPATTRH VHRKPVDEDL YKISPDLLYT KSKMKGIRGF ISSCLMPSCG C
101: RHVVPATTRH VHRKPVDEDL YKISPDLLYT KSKMKGIRGF ISSCLMPSCG C
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.