Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48761 | Canola | cytosol | 95.73 | 95.73 |
| CDY68652 | Canola | cytosol | 93.29 | 93.86 |
| Bra037483.1-P | Field mustard | cytosol | 85.98 | 86.5 |
| AT5G48500.1 | Thale cress | cytosol | 84.76 | 83.23 |
| Bra036167.1-P | Field mustard | cytosol | 66.46 | 68.12 |
| KRH17687 | Soybean | nucleus | 42.07 | 47.26 |
| KRG99533 | Soybean | nucleus | 40.24 | 44.9 |
| KRH66197 | Soybean | cytosol | 39.63 | 44.52 |
| KRH46588 | Soybean | nucleus | 39.63 | 43.92 |
| Solyc06g083080.2.1 | Tomato | nucleus | 39.63 | 43.05 |
| PGSC0003DMT400016876 | Potato | cytosol | 39.63 | 40.62 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 28.66 | 36.72 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 36.59 | 30.77 |
| Bra002152.1-P | Field mustard | nucleus | 22.56 | 22.42 |
Protein Annotations
Description
AT5G48500 (E=1e-072) | unknown protein
Coordinates
chrA02:+:23704893..23705641
Molecular Weight (calculated)
18688.2 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.816
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYEYGGGEY CRRGHVPAFG GWDWNDAVPF TQCFETATTQ QPSYLHHYPP YPQDRDLYLA GDLYDNHHLV APAVILLPRR RAKVGQEPKR TSSKEQHKFK
101: KDARESNAPR SCPTPVVKPR TARPKPVDED LYKVSPRLLS LKSTKKRGGG FGCISRCFLP TRVL
101: KDARESNAPR SCPTPVVKPR TARPKPVDED LYKVSPRLLS LKSTKKRGGG FGCISRCFLP TRVL
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.