Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 45.62 | 57.03 |
| KRH17687 | Soybean | nucleus | 51.88 | 56.85 |
| KRH66197 | Soybean | cytosol | 49.38 | 54.11 |
| KRG99533 | Soybean | nucleus | 49.38 | 53.74 |
| KRH46588 | Soybean | nucleus | 48.75 | 52.7 |
| AT5G48500.1 | Thale cress | cytosol | 44.38 | 42.52 |
| Bra037483.1-P | Field mustard | cytosol | 41.88 | 41.1 |
| CDX86302 | Canola | cytosol | 41.88 | 41.1 |
| CDX85342 | Canola | cytosol | 41.25 | 40.74 |
| CDY48761 | Canola | cytosol | 41.25 | 40.24 |
| CDY68652 | Canola | cytosol | 40.62 | 39.88 |
| Bra020695.1-P | Field mustard | cytosol | 40.62 | 39.63 |
| PGSC0003DMT400011484 | Potato | nucleus | 33.12 | 39.55 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 47.5 | 38.97 |
| Bra036167.1-P | Field mustard | cytosol | 38.12 | 38.12 |
| CDY00054 | Canola | cytosol | 37.5 | 37.27 |
| CDY19944 | Canola | cytosol | 38.12 | 34.27 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400016876 | EnsemblPlantsGene:PGSC0003DMG400006602 | EntrezGene:102587802 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | PGSC:PGSC0003DMG400006602 |
| RefSeq:XP_006365262.1 | SEG:seg | UniParc:UPI0002965C2B | UniProt:M1A894 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006602]
Coordinates
chr9:+:21578396..21581490
Molecular Weight (calculated)
18136.4 Da
IEP (calculated)
8.100
GRAVY (calculated)
-0.652
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESNYYFMN RSHIPAFGSW DCNNDFPIPF TQCFESARQA GLLRYSYSDD RDLYVAGDLY QNDILTPAMI VVPRRKRKSS ITNEGVGKAR KEGWVVCNCE
101: YDEEKKDTST VPPSPPPPKR APKAVDEDLY KISPQLLHSK PTRKGVRGFF SSCLLPTCAS
101: YDEEKKDTST VPPSPPPPKR APKAVDEDLY KISPQLLHSK PTRKGVRGFF SSCLLPTCAS
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.