Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19944 | Canola | cytosol | 98.12 | 88.2 |
| Bra020695.1-P | Field mustard | cytosol | 68.12 | 66.46 |
| AT5G48500.1 | Thale cress | cytosol | 68.12 | 65.27 |
| Bra037483.1-P | Field mustard | cytosol | 66.25 | 65.03 |
| KRH17687 | Soybean | nucleus | 39.38 | 43.15 |
| Solyc06g083080.2.1 | Tomato | nucleus | 39.38 | 41.72 |
| KRH46588 | Soybean | nucleus | 36.88 | 39.86 |
| KRH66197 | Soybean | cytosol | 36.25 | 39.73 |
| KRG99533 | Soybean | nucleus | 35.62 | 38.78 |
| PGSC0003DMT400016876 | Potato | cytosol | 38.12 | 38.12 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 25.62 | 32.03 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 33.75 | 27.69 |
| Bra002152.1-P | Field mustard | nucleus | 24.38 | 23.64 |
Protein Annotations
Description
AT5G48500 (E=3e-055) | unknown protein
Coordinates
chrA09:+:2360358..2361101
Molecular Weight (calculated)
18480.7 Da
IEP (calculated)
8.216
GRAVY (calculated)
-0.871
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYEYRGEYC RRGDVPAFGS WNWNDAVPFT QCFETATTPQ PAILHYAPYP QDRDLYLEDD LYDSHHHHHL VSPAVILLPR RKSRVGQEPK RDTSKEEHNF
101: KNEATRCPTP VEKRRMAAPK PVDEDLYKVS PQVISSKSTK KRGGVFGCIS RCFLPTSVRD
101: KNEATRCPTP VEKRRMAAPK PVDEDLYKVS PQVISSKSTK KRGGVFGCIS RCFLPTSVRD
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.