Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46588 | Soybean | nucleus | 94.56 | 93.92 |
| KRH17687 | Soybean | nucleus | 72.11 | 72.6 |
| KRH66197 | Soybean | cytosol | 66.67 | 67.12 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 47.62 | 54.69 |
| Solyc06g083080.2.1 | Tomato | nucleus | 53.74 | 52.32 |
| PGSC0003DMT400016876 | Potato | cytosol | 53.74 | 49.38 |
| AT5G48500.1 | Thale cress | cytosol | 46.94 | 41.32 |
| CDX86302 | Canola | cytosol | 45.58 | 41.1 |
| CDY68652 | Canola | cytosol | 45.58 | 41.1 |
| CDY48761 | Canola | cytosol | 45.58 | 40.85 |
| Bra037483.1-P | Field mustard | cytosol | 44.9 | 40.49 |
| Bra020695.1-P | Field mustard | cytosol | 44.9 | 40.24 |
| CDX85342 | Canola | cytosol | 44.22 | 40.12 |
| CDY00054 | Canola | cytosol | 40.82 | 37.27 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 48.98 | 36.92 |
| Bra036167.1-P | Field mustard | cytosol | 38.78 | 35.62 |
| KRH68834 | Soybean | nucleus | 36.73 | 35.06 |
| KRG97084 | Soybean | nucleus | 39.46 | 32.4 |
| CDY19944 | Canola | cytosol | 38.78 | 32.02 |
| KRG92592 | Soybean | cytosol | 25.85 | 26.95 |
| KRH34193 | Soybean | cytosol, extracellular, plastid | 25.17 | 20.56 |
Protein Annotations
| EMBL:ACUP02011100 | EnsemblPlants:KRG99533 | EnsemblPlantsGene:GLYMA_18G152300 | EntrezGene:100808210 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 |
| ProteinID:KRG99533 | ProteinID:KRG99533.1 | SEG:seg | UniParc:UPI000233EB32 | UniProt:I1N1R7 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr18:-:28896748..28899740
Molecular Weight (calculated)
16786.9 Da
IEP (calculated)
6.748
GRAVY (calculated)
-0.599
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MEECHYKKSQ VPAFGSWDWN DNLHFTQCFE SARQAGLLRC SYSESEERDL YVTGDLYENN VVTPAMIVVP RRRAKVVDQH EKETKLKNWI SDDVDSEPPS
101: PTPLPRPTSK PVDEDLYKIS PGLLYAKAKK KRGLCFFSSC LLPTCVA
101: PTPLPRPTSK PVDEDLYKIS PGLLYAKAKK KRGLCFFSSC LLPTCVA
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.