Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68834 | Soybean | nucleus | 67.04 | 77.92 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 43.58 | 50.0 |
| Solyc04g050790.2.1 | Tomato | cytosol | 35.2 | 47.01 |
| PGSC0003DMT400011484 | Potato | nucleus | 34.64 | 46.27 |
| KRG92592 | Soybean | cytosol | 34.08 | 43.26 |
| KRH17687 | Soybean | nucleus | 35.2 | 43.15 |
| KRH66197 | Soybean | cytosol | 33.52 | 41.1 |
| KRG99533 | Soybean | nucleus | 32.4 | 39.46 |
| KRH46588 | Soybean | nucleus | 31.28 | 37.84 |
| CDY02635 | Canola | nucleus | 34.64 | 37.13 |
| CDY66670 | Canola | nucleus | 31.84 | 34.76 |
| CDY53249 | Canola | nucleus | 34.64 | 34.64 |
| Bra002152.1-P | Field mustard | nucleus | 31.84 | 34.55 |
| CDY38505 | Canola | nucleus | 31.84 | 34.55 |
| KRH34193 | Soybean | cytosol, extracellular, plastid | 33.52 | 33.33 |
| AT5G18310.2 | Thale cress | nucleus | 29.61 | 31.74 |
Protein Annotations
| EMBL:ACUP02012176 | EnsemblPlants:KRG97084 | EnsemblPlantsGene:GLYMA_19G250900 | EntrezGene:100777580 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF3 |
| ProteinID:KRG97083.1 | ProteinID:KRG97084 | ProteinID:KRG97084.1 | ProteinID:KRG97085.1 | ProteinID:KRG97086.1 | ProteinID:KRG97087.1 |
| ProteinID:KRG97088.1 | SEG:seg | UniParc:UPI000233ED3C | UniProt:I1NCG0 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr19:-:49686875..49688940
Molecular Weight (calculated)
20411.9 Da
IEP (calculated)
10.518
GRAVY (calculated)
-0.726
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSGQIPAF GNWDYANELP ITQYFESARQ AGLVRYSSSS GESDPYVRAD RDLYAVDFKK PPIRNMPPST LKKATRNRGR RCVVVKEKEK EKESVKMNMR
101: KQGKVCDVTE QARKPVTVSK EMMRLHDAVP RSPLPRGVRL PKPVDEDLYK IPPELLRTTK RKKMLGFISK CLVPAACVS
101: KQGKVCDVTE QARKPVTVSK EMMRLHDAVP RSPLPRGVRL PKPVDEDLYK IPPELLRTTK RKKMLGFISK CLVPAACVS
001: MAHGRYDTYK KKSGQIPRFG EWEEANEMPI TQYFENPRQA GLIRHQYTTT SSASSTTTSS SSSSSSSAEA LKLASHHPRP RHLHAQRQTA GTKEKRGPQR
101: RVRDVSAQSD KYYIDVNGVK QFKNDVALTC KPPKPVDEDL YKIPPEFIHS STRKRRPSFL ACLVPCA
101: RVRDVSAQSD KYYIDVNGVK QFKNDVALTC KPPKPVDEDL YKIPPEFIHS STRKRRPSFL ACLVPCA
Arabidopsis Description
AT5G18310 protein [Source:UniProtKB/TrEMBL;Acc:B9DGJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.