Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34193 | Soybean | cytosol, extracellular, plastid | 75.18 | 58.89 |
| KRH68834 | Soybean | nucleus | 43.26 | 39.61 |
| KRG97084 | Soybean | nucleus | 43.26 | 34.08 |
| Solyc04g050790.2.1 | Tomato | cytosol | 31.21 | 32.84 |
| PGSC0003DMT400011484 | Potato | nucleus | 29.79 | 31.34 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 34.04 | 30.77 |
| KRH17687 | Soybean | nucleus | 31.21 | 30.14 |
| KRH66197 | Soybean | cytosol | 28.37 | 27.4 |
| KRG99533 | Soybean | nucleus | 26.95 | 25.85 |
| KRH46588 | Soybean | nucleus | 26.95 | 25.68 |
| CDY66670 | Canola | nucleus | 29.79 | 25.61 |
| Bra002152.1-P | Field mustard | nucleus | 29.79 | 25.45 |
| CDY38505 | Canola | nucleus | 29.79 | 25.45 |
| CDY02635 | Canola | nucleus | 29.79 | 25.15 |
| AT5G18310.2 | Thale cress | nucleus | 29.08 | 24.55 |
| CDY53249 | Canola | nucleus | 30.5 | 24.02 |
Protein Annotations
| EMBL:ACUP02012763 | EnsemblPlants:KRG92592 | EnsemblPlantsGene:GLYMA_20G220500 | EntrezGene:100805064 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF3 |
| ProteinID:KRG92592 | ProteinID:KRG92592.1 | UniParc:UPI000233DD37 | UniProt:K7N4Z8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr20:+:45562801..45564893
Molecular Weight (calculated)
16781.2 Da
IEP (calculated)
9.922
GRAVY (calculated)
-0.989
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEWKRDGHN IPAFGNWDFT DEFPITCYFE CATPARLHNK PRPLRNHIKQ ETRNKERRCR HVNGNANKGK LYDVREQQRK PIRISKHVQV QQYDTVPRTP
101: KPVDEDLYKI PPELLHTTNK RKKLLGFISK CLVLLVCHEH C
101: KPVDEDLYKI PPELLHTTNK RKKLLGFISK CLVLLVCHEH C
001: MAHGRYDTYK KKSGQIPRFG EWEEANEMPI TQYFENPRQA EALKLASHHP RPRHLHAQRQ TAGTKEKRGP QRRVRDVSAQ SDKYYIDVNG VKQFKNDVAL
101: TCKPPKPVDE DLYKIPPEFI HSSTRKRRPS FLACLVPCA
101: TCKPPKPVDE DLYKIPPEFI HSSTRKRRPS FLACLVPCA
Arabidopsis Description
AT5G18310 protein [Source:UniProtKB/TrEMBL;Acc:B9DGJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.