Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92592 | Soybean | cytosol | 58.89 | 75.18 |
| KRH68834 | Soybean | nucleus | 33.33 | 38.96 |
| Solyc04g050790.2.1 | Tomato | cytosol | 25.0 | 33.58 |
| KRG97084 | Soybean | nucleus | 33.33 | 33.52 |
| PGSC0003DMT400011484 | Potato | nucleus | 24.44 | 32.84 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 27.22 | 31.41 |
| KRH17687 | Soybean | nucleus | 23.89 | 29.45 |
| KRH66197 | Soybean | cytosol | 22.22 | 27.4 |
| KRG99533 | Soybean | nucleus | 20.56 | 25.17 |
| CDY02635 | Canola | nucleus | 23.33 | 25.15 |
| KRH46588 | Soybean | nucleus | 20.56 | 25.0 |
| CDY38505 | Canola | nucleus | 22.22 | 24.24 |
| CDY66670 | Canola | nucleus | 21.67 | 23.78 |
| Bra002152.1-P | Field mustard | nucleus | 21.67 | 23.64 |
| CDY53249 | Canola | nucleus | 22.78 | 22.91 |
| AT5G18310.2 | Thale cress | nucleus | 21.11 | 22.75 |
Protein Annotations
| EMBL:ACUP02006583 | EnsemblPlants:KRH34193 | EnsemblPlantsGene:GLYMA_10G169100 | EntrezGene:100805002 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF3 |
| ProteinID:KRH34193 | ProteinID:KRH34193.1 | SEG:seg | UniParc:UPI000233D207 | UniProt:K7LJW5 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr10:-:40342014..40343690
Molecular Weight (calculated)
21285.7 Da
IEP (calculated)
10.588
GRAVY (calculated)
-0.976
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPYPIPVL CCSLIQLAAS FNINHRTTLR KRKSNQEWKG DEHIPAFGNW DFTNEFPITR YFECATQSRL HNKPRHLRNH IKQETRNKER RCRHVNGNAN
101: KGKVYDVREQ QRKPNRISKH VQVQVQQHDT VPRTPKPVDE DLYKIPPELL HTTNKRKKLL GFISKCLVLL VCHEHSKLKQ
101: KGKVYDVREQ QRKPNRISKH VQVQVQQHDT VPRTPKPVDE DLYKIPPELL HTTNKRKKLL GFISKCLVLL VCHEHSKLKQ
001: MPITQYFENP RQAEALKLAS HHPRPRHLHA QRQTAGTKEK RGPQRRVRDV SAQSDKYYID VNGVKQFKND VALTCKPPKP VDEDLYKIPP EFIHSSTRKR
101: RPSFLACLVP CA
101: RPSFLACLVP CA
Arabidopsis Description
AT5G18310 protein [Source:UniProtKB/TrEMBL;Acc:B9DGJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.