Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011484 | Potato | nucleus | 97.01 | 97.01 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 44.78 | 38.46 |
| KRH68834 | Soybean | nucleus | 44.03 | 38.31 |
| KRG97084 | Soybean | nucleus | 47.01 | 35.2 |
| Solyc06g083080.2.1 | Tomato | nucleus | 35.82 | 31.79 |
| CDY66670 | Canola | nucleus | 38.81 | 31.71 |
| Bra002152.1-P | Field mustard | nucleus | 38.81 | 31.52 |
| CDY38505 | Canola | nucleus | 38.81 | 31.52 |
| KRG92592 | Soybean | cytosol | 32.84 | 31.21 |
| CDY02635 | Canola | nucleus | 38.06 | 30.54 |
| CDY53249 | Canola | nucleus | 38.81 | 29.05 |
| AT5G18310.2 | Thale cress | nucleus | 33.58 | 26.95 |
| KRH34193 | Soybean | cytosol, extracellular, plastid | 33.58 | 25.0 |
Protein Annotations
| EnsemblPlants:Solyc04g050790.2.1 | EnsemblPlantsGene:Solyc04g050790.2 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| PANTHER:PTHR33699 | PANTHER:PTHR33699:SF3 | UniParc:UPI0002766DC0 | UniProt:K4BS43 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4:-:48262406..48267946
Molecular Weight (calculated)
15201.3 Da
IEP (calculated)
10.505
GRAVY (calculated)
-0.804
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MESCRRSSGV QIPVFGDWDK ANELPITQYF ESARQAGLIH HSSSQQLYFH KTQFYAIPNN LPHTKTKGAA INKKRCGGKV EKTSGPQRQT AQRPTNPKPV
101: DEDLYKIPPH LLPGYKRKRM FGFFSRCLAP PCKA
101: DEDLYKIPPH LLPGYKRKRM FGFFSRCLAP PCKA
001: MAHGRYDTYK KKSGQIPRFG EWEEANEMPI TQYFENPRQA EALKLASHHP RPRHLHAQRQ TAGTKEKRGP QRRVRDVSAQ SDKYYIDVNG VKQFKNDVAL
101: TCKPPKPVDE DLYKIPPEFI HSSTRKRRPS FLACLVPCA
101: TCKPPKPVDE DLYKIPPEFI HSSTRKRRPS FLACLVPCA
Arabidopsis Description
AT5G18310 protein [Source:UniProtKB/TrEMBL;Acc:B9DGJ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.