Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002152.1-P | Field mustard | nucleus | 71.26 | 72.12 |
| CDY53249 | Canola | nucleus | 73.05 | 68.16 |
| CDY66670 | Canola | nucleus | 66.47 | 67.68 |
| CDY02635 | Canola | nucleus | 67.66 | 67.66 |
| CDY38505 | Canola | nucleus | 64.67 | 65.45 |
| PGSC0003DMT400011484 | Potato | nucleus | 27.54 | 34.33 |
| Solyc04g050790.2.1 | Tomato | cytosol | 26.95 | 33.58 |
| VIT_04s0043g00850.t01 | Wine grape | nucleus | 30.54 | 32.69 |
| KRH68834 | Soybean | nucleus | 28.74 | 31.17 |
| KRG97084 | Soybean | nucleus | 31.74 | 29.61 |
| KRG92592 | Soybean | cytosol | 24.55 | 29.08 |
| KRH34193 | Soybean | cytosol, extracellular, plastid | 22.75 | 21.11 |
| AT5G48500.1 | Thale cress | cytosol | 19.76 | 19.76 |
Protein Annotations
| MapMan:35.2 | EntrezGene:831949 | ProteinID:AED92537.1 | EMBL:AK317171 | ProteinID:ANM70229.1 | ArrayExpress:AT5G18310 |
| EnsemblPlantsGene:AT5G18310 | RefSeq:AT5G18310 | TAIR:AT5G18310 | RefSeq:AT5G18310-TAIR-G | EnsemblPlants:AT5G18310.2 | TAIR:AT5G18310.2 |
| UniProt:B9DGJ0 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_001331858.1 | RefSeq:NP_850843.1 | ProteinID:OAO92280.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33699 | PANTHER:PTHR33699:SF3 | UniParc:UPI0000196DB4 | SEG:seg | : | : |
Description
AT5G18310 protein [Source:UniProtKB/TrEMBL;Acc:B9DGJ0]
Coordinates
chr5:+:6061298..6063336
Molecular Weight (calculated)
18864.1 Da
IEP (calculated)
10.254
GRAVY (calculated)
-0.959
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHGRYDTYK KKSGQIPRFG EWEEANEMPI TQYFENPRQA GLIRHQYTTT SSASSTTTSS SSSSSSSAEA LKLASHHPRP RHLHAQRQTA GTKEKRGPQR
101: RVRDVSAQSD KYYIDVNGVK QFKNDVALTC KPPKPVDEDL YKIPPEFIHS STRKRRPSFL ACLVPCA
101: RVRDVSAQSD KYYIDVNGVK QFKNDVALTC KPPKPVDEDL YKIPPEFIHS STRKRRPSFL ACLVPCA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.