Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037483.1-P | Field mustard | cytosol | 83.23 | 85.28 |
| CDX86302 | Canola | cytosol | 83.23 | 85.28 |
| Bra020695.1-P | Field mustard | cytosol | 83.23 | 84.76 |
| CDX85342 | Canola | cytosol | 81.44 | 83.95 |
| CDY48761 | Canola | cytosol | 79.64 | 81.1 |
| CDY68652 | Canola | cytosol | 78.44 | 80.37 |
| CDY00054 | Canola | cytosol | 69.46 | 72.05 |
| Bra036167.1-P | Field mustard | cytosol | 65.27 | 68.12 |
| CDY19944 | Canola | cytosol | 65.27 | 61.24 |
| KRH17687 | Soybean | nucleus | 43.11 | 49.32 |
| KRG99533 | Soybean | nucleus | 41.32 | 46.94 |
| KRH66197 | Soybean | cytosol | 40.72 | 46.58 |
| Solyc06g083080.2.1 | Tomato | nucleus | 41.32 | 45.7 |
| KRH46588 | Soybean | nucleus | 40.12 | 45.27 |
| PGSC0003DMT400016876 | Potato | cytosol | 42.52 | 44.38 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 29.94 | 39.06 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 37.72 | 32.31 |
| AT5G18310.2 | Thale cress | nucleus | 19.76 | 19.76 |
Protein Annotations
| MapMan:35.2 | EntrezGene:834906 | UniProt:A0A178UFJ5 | ProteinID:AED95678.1 | ArrayExpress:AT5G48500 | EnsemblPlantsGene:AT5G48500 |
| RefSeq:AT5G48500 | TAIR:AT5G48500 | RefSeq:AT5G48500-TAIR-G | EnsemblPlants:AT5G48500.1 | TAIR:AT5G48500.1 | EMBL:AY085368 |
| EMBL:BT002825 | EMBL:BT004385 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0080167 |
| RefSeq:NP_568700.1 | ProteinID:OAO92543.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | UniProt:Q8LEL0 | UniParc:UPI000000BDE1 |
| SEG:seg | : | : | : | : | : |
Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
Coordinates
chr5:+:19652980..19654355
Molecular Weight (calculated)
18974.6 Da
IEP (calculated)
9.686
GRAVY (calculated)
-0.678
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.