Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036167.1-P | Field mustard | cytosol | 88.2 | 98.12 |
| CDY00054 | Canola | cytosol | 79.21 | 87.58 |
| CDY68652 | Canola | cytosol | 62.92 | 68.71 |
| CDY48761 | Canola | cytosol | 62.92 | 68.29 |
| AT5G48500.1 | Thale cress | cytosol | 61.24 | 65.27 |
| CDX86302 | Canola | cytosol | 58.99 | 64.42 |
| CDX85342 | Canola | cytosol | 58.43 | 64.2 |
| KRH17687 | Soybean | nucleus | 35.39 | 43.15 |
| Solyc06g083080.2.1 | Tomato | nucleus | 35.39 | 41.72 |
| KRH46588 | Soybean | nucleus | 33.15 | 39.86 |
| KRH66197 | Soybean | cytosol | 32.58 | 39.73 |
| KRG99533 | Soybean | nucleus | 32.02 | 38.78 |
| PGSC0003DMT400016876 | Potato | cytosol | 34.27 | 38.12 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 23.03 | 32.03 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 32.02 | 29.23 |
| CDY66670 | Canola | nucleus | 21.91 | 23.78 |
| CDY38505 | Canola | nucleus | 21.91 | 23.64 |
| CDY02635 | Canola | nucleus | 20.79 | 22.16 |
| CDY53249 | Canola | nucleus | 21.35 | 21.23 |
Protein Annotations
| EnsemblPlants:CDY19944 | EnsemblPlantsGene:GSBRNA2T00009750001 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | ProteinID:CDY19944 | ProteinID:CDY19944.1 |
| SEG:seg | UniParc:UPI0004EE511E | UniProt:A0A078G3F3 | MapMan:35.2 | : | : |
Description
BnaA09g03070DBnaA09g03070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3F3]
Coordinates
chrLK032102:-:67112..70869
Molecular Weight (calculated)
20737.5 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.781
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGWICRLDR SYIRIREEFL IEYRGEYCRR GDVPAFGSWN WNDAVPFTQC FETATTPQPA ILHYAPYPQD RDLYLEDDLY DSHHHHHLVS PAVILLPRRK
101: SRVGQEPKRD TSKEEHNFKN EATRCPTPVE KRRMAAPKPV DEDLYKVSPQ VISSKSTKKR GGVFGCISRC FLPTSVRD
101: SRVGQEPKRD TSKEEHNFKN EATRCPTPVE KRRMAAPKPV DEDLYKVSPQ VISSKSTKKR GGVFGCISRC FLPTSVRD
001: MEVSDGSSQV LNSMKHVASL RADEDPDETS LLLSSTLLDL VVFRLVLVLY CVRVLMLDQY QETIALSQEV MMEDGRREFN VPMNCPIPVV KRRMKAPKHV
101: DEDLFKIFPQ ATTYLRQIQK GGGSGCFEFI RGEVCTKDLS QNNTFYFIF
101: DEDLFKIFPQ ATTYLRQIQK GGGSGCFEFI RGEVCTKDLS QNNTFYFIF
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9SHW4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.