Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48761 | Canola | cytosol | 97.55 | 96.95 |
| Bra020695.1-P | Field mustard | cytosol | 93.86 | 93.29 |
| CDX86302 | Canola | cytosol | 81.6 | 81.6 |
| CDX85342 | Canola | cytosol | 79.75 | 80.25 |
| AT5G48500.1 | Thale cress | cytosol | 80.37 | 78.44 |
| CDY00054 | Canola | cytosol | 68.1 | 68.94 |
| CDY19944 | Canola | cytosol | 68.71 | 62.92 |
| KRH17687 | Soybean | nucleus | 41.72 | 46.58 |
| KRG99533 | Soybean | nucleus | 41.1 | 45.58 |
| KRH46588 | Soybean | nucleus | 40.49 | 44.59 |
| KRH66197 | Soybean | cytosol | 38.65 | 43.15 |
| Solyc06g083080.2.1 | Tomato | nucleus | 39.26 | 42.38 |
| PGSC0003DMT400016876 | Potato | cytosol | 39.88 | 40.62 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 28.22 | 35.94 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 36.2 | 30.26 |
| CDY02635 | Canola | nucleus | 23.31 | 22.75 |
| CDY66670 | Canola | nucleus | 22.7 | 22.56 |
| CDY38505 | Canola | nucleus | 22.7 | 22.42 |
| CDY53249 | Canola | nucleus | 23.31 | 21.23 |
Protein Annotations
| EnsemblPlants:CDY68652 | EnsemblPlantsGene:GSBRNA2T00076544001 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 | ProteinID:CDY68652 | ProteinID:CDY68652.1 |
| UniParc:UPI0004EE0ACA | UniProt:A0A078JTA0 | MapMan:35.2 | : | : | : |
Description
BnaCnng59930DBnaCnng59930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTA0]
Coordinates
chrLK037731:-:4010..5102
Molecular Weight (calculated)
18562.1 Da
IEP (calculated)
9.753
GRAVY (calculated)
-0.761
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQEYGGEYC RRGHVPAFGG WDWNDAVPFT QCFETATTQQ PSYLHHYPPY PQDRDLYLAG DLYDNHHLVA PAVILLPRRR AKVGQEPKRT TSKEHHNFKK
101: DARVSNAPRS CPTPVVKPRT ARPKPVDEDL YKVSPRLLSL ESTKKRGGGF GCISRCFLPT RVL
101: DARVSNAPRS CPTPVVKPRT ARPKPVDEDL YKVSPRLLSL ESTKKRGGGF GCISRCFLPT RVL
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.