Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66197 | Soybean | cytosol | 82.88 | 82.88 |
| KRH46588 | Soybean | nucleus | 73.29 | 72.3 |
| KRG99533 | Soybean | nucleus | 72.6 | 72.11 |
| VIT_00s0333g00060.t01 | Wine grape | cytosol | 50.0 | 57.03 |
| Solyc06g083080.2.1 | Tomato | nucleus | 54.11 | 52.32 |
| PGSC0003DMT400016876 | Potato | cytosol | 56.85 | 51.88 |
| Bra037483.1-P | Field mustard | cytosol | 48.63 | 43.56 |
| CDX86302 | Canola | cytosol | 48.63 | 43.56 |
| AT5G48500.1 | Thale cress | cytosol | 49.32 | 43.11 |
| CDX85342 | Canola | cytosol | 47.26 | 42.59 |
| Bra020695.1-P | Field mustard | cytosol | 47.26 | 42.07 |
| CDY48761 | Canola | cytosol | 47.26 | 42.07 |
| CDY68652 | Canola | cytosol | 46.58 | 41.72 |
| CDY00054 | Canola | cytosol | 45.21 | 40.99 |
| Bra036167.1-P | Field mustard | cytosol | 43.15 | 39.38 |
| KRH68834 | Soybean | nucleus | 40.41 | 38.31 |
| PGSC0003DMT400051989 | Potato | extracellular, plasma membrane | 49.32 | 36.92 |
| CDY19944 | Canola | cytosol | 43.15 | 35.39 |
| KRG97084 | Soybean | nucleus | 43.15 | 35.2 |
| KRG92592 | Soybean | cytosol | 30.14 | 31.21 |
| KRH34193 | Soybean | cytosol, extracellular, plastid | 29.45 | 23.89 |
Protein Annotations
| EMBL:ACUP02007827 | EnsemblPlants:KRH17687 | EnsemblPlantsGene:GLYMA_13G008000 | EntrezGene:100797475 | PANTHER:PTHR33699 | PANTHER:PTHR33699:SF2 |
| ProteinID:KRH17687 | ProteinID:KRH17687.1 | UniParc:UPI000233B677 | UniProt:I1LXN4 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr13:-:2230682..2234063
Molecular Weight (calculated)
17241.4 Da
IEP (calculated)
8.184
GRAVY (calculated)
-0.844
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYYYQRHH VPAFGSWDWN DNLPFTQCFE SARQAGLLRY GYSESEDRDL YVTGDLYEND FVKPAVIVVP RRREKVRCQN EKDEKKQNWV SNVKELPSPT
101: SPIQRPKPKP VDEDLYKISP ELLYAKNRKK RGLCFFPSCL MPTCIA
101: SPIQRPKPKP VDEDLYKISP ELLYAKNRKK RGLCFFPSCL MPTCIA
001: MDYEYGGGEY CRRGHVPAFG SWDWNDAVPF TQCFETATTQ QPAFLHYASY PQDRDLYLAG DLYDNHHLVA PAVIIVPRRR AKVGQEPAEK KRNVSKQQHN
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
101: YKTEAREFNA PVSCPTPVVK RRMKAPKPVD EDLYKVSPQL LSVKSKRKRG GGGFGCISRC FLPTRVL
Arabidopsis Description
Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:UniProtKB/TrEMBL;Acc:Q8LEL0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.