CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037029.1-P	Field mustard	plastid	99.58	99.58
CDX72385	Canola	plastid	96.66	96.46
AT4G33030.1	Thale cress	plastid	91.86	92.24
GSMUA_Achr10P...	Banana	cytosol	70.56	86.67
CDX75318	Canola	plastid	91.44	85.55
KRH66819	Soybean	plastid	77.24	78.06
VIT_04s0008g01190.t01	Wine grape	plastid	78.91	77.94
KRG95142	Soybean	plastid	77.04	77.36
PGSC0003DMT400049056	Potato	cytosol	77.45	77.13
Solyc08g063080.2.1	Tomato	plastid	76.83	76.67
Os05t0387200-01	Rice	plastid	76.62	76.62
CDX68933	Canola	cytosol	91.23	75.34
HORVU1Hr1G056630.1	Barley	plastid	74.74	74.9
HORVU1Hr1G056610.1	Barley	plastid	74.74	74.9
TraesCS1A01G241900.1	Wheat	plastid	74.74	74.9
TraesCS1D01G241800.2	Wheat	plastid	74.74	74.9
TraesCS1B01G253500.1	Wheat	plastid	74.53	74.69
Zm00001d009967_P001	Maize	plastid	73.28	74.36
EES18158	Sorghum	plastid	73.9	74.06

Protein Annotations

EnsemblPlants:CDY13514	EnsemblPlantsGene:GSBRNA2T00077829001	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:A0A078FKR0	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000
PANTHER:PTHR43000:SF10	PFAM:PF01370	ProteinID:CDY13514	ProteinID:CDY13514.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EDFAD1	UniProt:A0A078FKR0	MapMan:5.3.6	:	:	:

Description

BnaA03g52320DBnaA03g52320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKR0]

Coordinates

chrLK032035:+:787751..790153

Molecular Weight (calculated)

53623.0 Da

IEP (calculated)

8.373

GRAVY (calculated)

-0.309

Length

479 amino acids

Sequence
(BLAST)

001: MAYLLSASCP LAISLTSSSK NSVKPFGLNQ TFFNPQPLSN SSFLKGLLFQ EKKPKRRRSC VFLATATSQQ APPETSTNNN NSPSKPKRVM VIGGDGYCGW
101: ATALHLSKKN YEVAIVDNLV RRLFDHQLGL ESLTPIASIH DRISRWKALT GKTIDLYIGD ICDFEFLADS FNSFEPDSVV HFGEQRSAPY SMIDRSRAVF
201: TQHNNVIGTL NVLFAIKEFR EECHLVKLGT MGEYGTPNID IEEGYITITH NGRTDTLPYP KQASSFYHLS KVHDSHNIAF TCKAWGIRAT DLNQGVVYGV
301: KTDETEMHEE LRNRLDYDAV FGTALNRFCV QAAVGHPLTV YGKGGQTRGY LDIRDTVQCV ELAIANPAKA GEFRVFNQFT EQFSVNELAS LVTKAGLKLG
401: LDVTKMTVPN PRVEAEEHYY NAKHTKLMEL GLEPHYLSES LLDSLLNFAV QFRDRVDKKQ IMPSVSWKKI GVKTKSMNP

Best Arabidopsis Sequence Match ( AT4G33030.1 )
(BLAST)

001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

Arabidopsis Description

SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.