CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95142	Soybean	plastid	97.05	96.44
GSMUA_Achr10P...	Banana	cytosol	72.57	88.21
PGSC0003DMT400049056	Potato	cytosol	81.65	80.46
Solyc08g063080.2.1	Tomato	plastid	80.59	79.58
VIT_04s0008g01190.t01	Wine grape	plastid	81.01	79.18
Bra011407.1-P	Field mustard	plastid	78.69	78.2
AT4G33030.1	Thale cress	plastid	78.48	77.99
Zm00001d009967_P001	Maize	plastid	77.64	77.97
EES18158	Sorghum	plastid	78.06	77.41
CDY13514	Canola	plastid	78.06	77.24
Bra037029.1-P	Field mustard	plastid	78.06	77.24
CDX72385	Canola	plastid	78.06	77.08
Os05t0387200-01	Rice	plastid	77.85	77.04
HORVU1Hr1G056610.1	Barley	plastid	77.0	76.36
HORVU1Hr1G056630.1	Barley	plastid	77.0	76.36
TraesCS1A01G241900.1	Wheat	plastid	77.0	76.36
TraesCS1D01G241800.2	Wheat	plastid	77.0	76.36
TraesCS1B01G253500.1	Wheat	plastid	76.58	75.94
CDX75318	Canola	plastid	78.48	72.66
CDX68933	Canola	cytosol	77.85	63.62

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.25.10	MapMan:5.3.6	UniProt:A0A0R0KIG7	EMBL:ACUP02002014	InterPro:Epimerase_deHydtase
EnsemblPlantsGene:GLYMA_03G131100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	EnsemblPlants:KRH66819
ProteinID:KRH66819	ProteinID:KRH66819.1	ProteinID:KRH66820.1	ProteinID:KRH66821.1	ProteinID:KRH66822.1	ProteinID:KRH66823.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR43000	PANTHER:PTHR43000:SF10	SUPFAM:SSF51735	UniParc:UPI0006EDE90D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:34628539..34631553

Molecular Weight (calculated)

53173.4 Da

IEP (calculated)

8.331

GRAVY (calculated)

-0.289

Length

474 amino acids

Sequence
(BLAST)

001: MAQLLSSSCS LTICSRNKPY LKPFNNCSTL FSITLACNNS KTPFRRLFLQ EQKPRKGSLV VHAAAVSTSQ ETPVQTSSGD PFKPQRVMVI GGDGYCGWAT
101: ALHLSNKGYE VAIVDSLVRR LFDHQLGLDS LTPISSIQNR LQRWKSLTGK TIELYIGDIC DFEFLSETFK SYEPDAVVHF GEQRSAPYSM IDRSRAVYTQ
201: QNNVIGTLNV LFAIKEFREQ CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVRT
301: DETAMHEELY NRFDYDGIFG TALNRFCVQA AVGHPLTVYG KGGQTRGFLD IRDTVQCVEL AIANPAKPGE FRVFNQFTEQ FSVNQLANLV TKAGEKLGIE
401: VKTINVPNPR VEAEEHYYNC KNTKLVDLGL RPHFLSDSLL DSLLNFAVQY KDRVDTKQIM PSVSWKKIGV KTKT

Best Arabidopsis Sequence Match ( AT4G33030.1 )
(BLAST)

001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

Arabidopsis Description

SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.