Factsheet for GSMUA_Achr10P12740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009967_P001	Maize	plastid	91.28	75.42
EES18158	Sorghum	plastid	92.31	75.31
VIT_04s0008g01190.t01	Wine grape	plastid	92.05	74.02
Os05t0387200-01	Rice	plastid	90.77	73.9
TraesCS1D01G241800.2	Wheat	plastid	90.26	73.64
TraesCS1A01G241900.1	Wheat	plastid	90.26	73.64
TraesCS1B01G253500.1	Wheat	plastid	90.0	73.43
HORVU1Hr1G056610.1	Barley	plastid	90.0	73.43
HORVU1Hr1G056630.1	Barley	plastid	90.0	73.43
KRH66819	Soybean	plastid	88.21	72.57
PGSC0003DMT400049056	Potato	cytosol	89.49	72.56
KRG95142	Soybean	plastid	88.46	72.33
Solyc08g063080.2.1	Tomato	plastid	88.97	72.29
Bra011407.1-P	Field mustard	plastid	87.18	71.28
AT4G33030.1	Thale cress	plastid	86.92	71.07
CDY13514	Canola	plastid	86.67	70.56
Bra037029.1-P	Field mustard	plastid	86.67	70.56
CDX72385	Canola	plastid	86.15	70.0
CDX75318	Canola	plastid	86.67	66.02
CDX68933	Canola	cytosol	86.92	58.45

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.25.10	MapMan:5.3.6	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006950	GO:GO:0007154	GO:GO:0008146	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009247	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016036	GO:GO:0016740	GO:GO:0050662	EnsemblPlantsGene:GSMUA_Achr10G12740_001	EnsemblPlants:GSMUA_Achr10P12740_001
EnsemblPlants:GSMUA_Achr10T12740_001	UniProt:M0RHQ0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR43000	PANTHER:PTHR43000:SF10
SUPFAM:SSF51735	UniParc:UPI000294CC19	SEG:seg	:	:	:

Description

UDP-sulfoquinovose synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G12740_001]

Coordinates

chr10:-:21666711..21668457

Molecular Weight (calculated)

43688.0 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.215

Length

390 amino acids

Sequence
(BLAST)

001: MIIGGDGYCG WATALHLSNK GYEVAIVDNL VRRLFDHQLG IDSLTPISSI QNRVRRWKSV TGKSIQLFIG DICDFEFLSE AFKSFEPDSV VHFGEQRSAP
101: YSMIDRSRAV YTQHNNVIGT LNVLFAIKEF SQECHLVKLG TMGEYGTPNI DIEEGYITIT HNGRTDTLPY PKQASSFYHL SKVHDSHNIA FTCKAWGIRA
201: TDLNQGVVYG VRTDETDMHE ELCNRFDYDG VFGTALNRFC VQAAVGHPLT VYGKGGQTRG YLDIRDTVQC VELAVANPAK PGEFRVFNQF TEQFSVNDLA
301: RLVTTAGKKL GLDVQTISVP NPRVEAEEHY YNAKHTKLIE LGLRPHLLSE SLLDSLLNFA IKFKDQVDPA QIMPTVSWKK IGVKTRTVSV

Best Arabidopsis Sequence Match ( AT4G33030.1 )
(BLAST)

001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

Arabidopsis Description

SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.