Factsheet for HORVU1Hr1G056630.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G056610.1	Barley	plastid	100.0	100.0
TraesCS1A01G241900.1	Wheat	plastid	99.37	99.37
TraesCS1D01G241800.2	Wheat	plastid	99.16	99.16
TraesCS1B01G253500.1	Wheat	plastid	98.95	98.95
GSMUA_Achr10P...	Banana	cytosol	73.43	90.0
Os05t0387200-01	Rice	plastid	89.96	89.77
EES18158	Sorghum	plastid	89.75	89.75
Zm00001d009967_P001	Maize	plastid	88.49	89.62
PGSC0003DMT400049056	Potato	cytosol	79.71	79.21
Solyc08g063080.2.1	Tomato	plastid	79.29	78.96
KRH66819	Soybean	plastid	76.36	77.0
VIT_04s0008g01190.t01	Wine grape	plastid	77.82	76.7
KRG95142	Soybean	plastid	76.36	76.52
AT4G33030.1	Thale cress	plastid	76.36	76.52
Bra011407.1-P	Field mustard	plastid	75.94	76.1
CDY13514	Canola	plastid	74.9	74.74
Bra037029.1-P	Field mustard	plastid	74.9	74.74
CDX72385	Canola	plastid	74.69	74.38
CDX75318	Canola	plastid	75.52	70.51
CDX68933	Canola	cytosol	75.73	62.41

Protein Annotations

EnsemblPlants:HORVU1Hr1G056630.1	EnsemblPlantsGene:HORVU1Hr1G056630	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000	PANTHER:PTHR43000:SF10
PFAM:PF01370	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000294DAAF	UniProt:M0V3W4	MapMan:5.3.6

Description

No Description!

Coordinates

chrchr1H:+:415278902..415281508

Molecular Weight (calculated)

52620.5 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.289

Length

478 amino acids

Sequence
(BLAST)

001: MANLVTNCGF SPSPAVKAHC NSPSYGHNFI RLQNSKSSTS SLNLKSSSKR SNKLYVTCAS TSVQGQTQTP LTGSQQASGH SSSKPKKVMV IGGDGYCGWA
101: TALHLSNKGY EVAIVDNLVR RLFDHQLGLD SLTPIASIQN RIRRWKSLTG KTIQLFIGDI CDFEFLSEAF KSFEPDSAVH FGEQRSAPFS MIDRSRAVYT
201: QNNNVIGTLN VLFAMKEFSE ECHLVKLGTM GEYGTPNIDI EEGFLTITHN GRTDTLPYPK QASSFYHLSK VHDSHNIAFT CKAWGIRATD LNQGVVYGIR
301: TDETAMHEEL SNRLDYDGIF GTALNRFCVQ AAVGHPLTVY GKGGQTRGYL DIRDTVQCVE LAIANPAKPG EFRVFNQFTE QFSVNELAKL VTAAGAKLGL
401: DVQTKSVPNP RVEAEEHYYN AKHSKLSELG LVPHLLSDSL LDSLLNFAVQ YKDRVDTAQI MPSVSWKKMG AKPKTISV

Best Arabidopsis Sequence Match ( AT4G33030.1 )
(BLAST)

001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

Arabidopsis Description

SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.