CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13514	Canola	plastid	96.46	96.66
AT4G33030.1	Thale cress	plastid	91.04	91.61
GSMUA_Achr10P...	Banana	cytosol	70.0	86.15
CDX75318	Canola	plastid	91.25	85.55
KRH66819	Soybean	plastid	77.08	78.06
VIT_04s0008g01190.t01	Wine grape	plastid	78.33	77.53
KRG95142	Soybean	plastid	76.88	77.36
PGSC0003DMT400049056	Potato	cytosol	77.29	77.13
Os05t0387200-01	Rice	plastid	76.88	77.04
Solyc08g063080.2.1	Tomato	plastid	76.67	76.67
CDX68933	Canola	cytosol	91.25	75.52
HORVU1Hr1G056630.1	Barley	plastid	74.38	74.69
HORVU1Hr1G056610.1	Barley	plastid	74.38	74.69
TraesCS1A01G241900.1	Wheat	plastid	74.38	74.69
TraesCS1D01G241800.2	Wheat	plastid	74.38	74.69
TraesCS1B01G253500.1	Wheat	plastid	74.17	74.48
Zm00001d009967_P001	Maize	plastid	73.12	74.36
EES18158	Sorghum	plastid	73.75	74.06

Protein Annotations

EnsemblPlants:CDX72385	EnsemblPlantsGene:GSBRNA2T00099878001	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:A0A078C6A8	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000
PANTHER:PTHR43000:SF10	PFAM:PF01370	ProteinID:CDX72385	ProteinID:CDX72385.1	SUPFAM:SSF51735	UniParc:UPI0004EE4C27
MapMan:5.3.6	:	:	:	:	:

Description

BnaC07g44070D

Coordinates

chrLK031796:+:966129..968429

Molecular Weight (calculated)

53721.1 Da

IEP (calculated)

8.675

GRAVY (calculated)

-0.340

Length

480 amino acids

Sequence
(BLAST)

001: MAHLLSASCP LAVSLTSSSK NSVKPFGLNQ TFFNPQPLSN HPSLKALHFQ EKKPKRRRRS CVFLATATSQ QAPPETSTNN NTSPSKPKRV MVIGGDGYCG
101: WATALHLSKK NYQVAVVDNL VRRLFDHQLG LESLTPIASI HDRISRWKAL TGKTIELYVG DICDFEFLAD SFNSFEPDSV VHFGEQRSAP YSMIDRSRAV
201: FTQHNNVIGT LNVLFAIKEF REECHLVKLG TMGEYGTPNI DIEEGYITIT HNGRTDTLPY PKQASSFYHL SKVHDSHNIA FTCKAWGIRA TDLNQGVVYG
301: VKTDETEMHE ELRNRLDYDA VFGTALNRFC VQAAVGHPLT VYGKGGQTRG YLDIRDTVQC VELAIANPAK AGEFRVFNQF TEQFSVNELA SLVTKAGLKL
401: GLDVTKMTVP NPRVEAEEHY YNAKHTKLME LGLEPHYLSE SLLDSLLNFA VQFKDRVDKK QIMPSVSWKK IGVKTKSMNP

Best Arabidopsis Sequence Match ( AT4G33030.1 )
(BLAST)

001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

Arabidopsis Description

SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.