Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011407.1-P | Field mustard | plastid | 92.03 | 92.03 |
| Bra037029.1-P | Field mustard | plastid | 92.24 | 91.86 |
| CDY13514 | Canola | plastid | 92.24 | 91.86 |
| CDX72385 | Canola | plastid | 91.61 | 91.04 |
| GSMUA_Achr10P... | Banana | cytosol | 71.07 | 86.92 |
| CDX75318 | Canola | plastid | 91.82 | 85.55 |
| PGSC0003DMT400049056 | Potato | cytosol | 79.66 | 79.0 |
| Solyc08g063080.2.1 | Tomato | plastid | 79.04 | 78.54 |
| KRH66819 | Soybean | plastid | 77.99 | 78.48 |
| VIT_04s0008g01190.t01 | Wine grape | plastid | 79.45 | 78.14 |
| KRG95142 | Soybean | plastid | 77.99 | 77.99 |
| Os05t0387200-01 | Rice | plastid | 77.99 | 77.66 |
| HORVU1Hr1G056630.1 | Barley | plastid | 76.52 | 76.36 |
| HORVU1Hr1G056610.1 | Barley | plastid | 76.52 | 76.36 |
| TraesCS1A01G241900.1 | Wheat | plastid | 76.52 | 76.36 |
| TraesCS1D01G241800.2 | Wheat | plastid | 76.52 | 76.36 |
| TraesCS1B01G253500.1 | Wheat | plastid | 76.1 | 75.94 |
| Zm00001d009967_P001 | Maize | plastid | 74.63 | 75.42 |
| EES18158 | Sorghum | plastid | 75.47 | 75.31 |
| CDX68933 | Canola | cytosol | 91.4 | 75.17 |
Protein Annotations
| PDB:1I24 | PDB:1I2B | PDB:1I2C | PDB:1QRR | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 |
| MapMan:5.3.6 | EntrezGene:829440 | ProteinID:AEE86162.1 | EMBL:AF022082 | EMBL:AF380641 | ArrayExpress:AT4G33030 |
| EnsemblPlantsGene:AT4G33030 | RefSeq:AT4G33030 | TAIR:AT4G33030 | RefSeq:AT4G33030-TAIR-G | EnsemblPlants:AT4G33030.1 | TAIR:AT4G33030.1 |
| EMBL:AY113071 | Unigene:At.2479 | ProteinID:CAA21212.1 | ProteinID:CAB80020.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008146 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009247 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 |
| GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016036 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0046507 |
| GO:GO:0050662 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_195029.1 | UniProt:O48917 | PFAM:PF01370 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43000 | PANTHER:PTHR43000:SF10 | Symbol:SQD1 | SUPFAM:SSF51735 | UniParc:UPI00000540C6 |
| SEG:seg | : | : | : | : | : |
Description
SQD1UDP-sulfoquinovose synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48917]
Coordinates
chr4:+:15935373..15937833
Molecular Weight (calculated)
53116.4 Da
IEP (calculated)
8.312
GRAVY (calculated)
-0.269
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT
101: ALHLSKKNYE VCIVDNLVRR LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF GEQRSAPYSM IDRSRAVYTQ
201: HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT
301: DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD
401: VKKMTVPNPR VEAEEHYYNA KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.