Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G04600.1 | KRG98291 | AT5G58720.1 | 21798944 |
| AT5G04600.1 | KRH30312 | AT5G58720.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71854 | Soybean | nucleus | 58.43 | 24.64 |
| KRH38103 | Soybean | nucleus | 56.18 | 23.36 |
| AT5G04600.1 | Thale cress | cytosol, plastid | 48.31 | 19.37 |
| VIT_14s0030g01680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 48.31 | 18.94 |
| PGSC0003DMT400018358 | Potato | nucleus | 46.07 | 18.89 |
| Solyc06g074720.2.1 | Tomato | nucleus | 46.07 | 18.72 |
| Zm00001d050300_P002 | Maize | mitochondrion, nucleus | 43.82 | 18.14 |
| CDY44869 | Canola | cytosol, plastid | 44.94 | 17.94 |
| Bra028783.1-P | Field mustard | cytosol, plastid | 43.82 | 17.81 |
| KXG34111 | Sorghum | cytosol | 42.7 | 17.67 |
| PGSC0003DMT400001225 | Potato | nucleus | 42.7 | 17.59 |
| Bra009440.1-P | Field mustard | cytosol, plastid | 43.82 | 17.49 |
| CDX70212 | Canola | cytosol, plastid | 43.82 | 17.49 |
| GSMUA_Achr3P18350_001 | Banana | nucleus | 42.7 | 17.35 |
| CDY04918 | Canola | cytosol, plastid | 42.7 | 17.35 |
| Os08t0412200-01 | Rice | nucleus | 40.45 | 16.82 |
| CDY14147 | Canola | plastid | 41.57 | 16.59 |
| TraesCS2B01G205700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 38.2 | 15.96 |
| HORVU2Hr1G033820.10 | Barley | cytosol, mitochondrion, nucleus, plastid | 38.2 | 15.89 |
| TraesCS2A01G178900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 38.2 | 15.89 |
| TraesCS6A01G011400.1 | Wheat | nucleus | 38.2 | 15.89 |
| TraesCS6B01G017700.1 | Wheat | nucleus | 38.2 | 15.89 |
| TraesCS6D01G014200.1 | Wheat | nucleus | 38.2 | 15.89 |
| TraesCS2D01G187400.1 | Wheat | mitochondrion, nucleus | 38.2 | 15.25 |
| OQU80418 | Sorghum | nucleus | 26.97 | 15.09 |
| HORVU6Hr1G002240.2 | Barley | nucleus | 38.2 | 14.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.94 | 13.42 |
| Solyc11g066630.1.1 | Tomato | nucleus | 10.11 | 6.21 |
Protein Annotations
| EMBL:ACUP02006014 | EnsemblPlants:KRH40007 | EnsemblPlantsGene:GLYMA_09G232800 | PANTHER:PTHR44517 | ProteinID:KRH40007 | ProteinID:KRH40007.1 |
| UniParc:UPI0006ED996D | UniProt:A0A0R0ICC1 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:45584164..45588893
Molecular Weight (calculated)
10090.3 Da
IEP (calculated)
10.108
GRAVY (calculated)
-0.688
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MAQSVRHDLD SEMGTKVKKA MKNLKRATTN KPSEDADFLS LEGGPVCKQP EQKLLKNTAT VLYVGRIPHG FYEKEMEGGK IKTFWVHRI
001: MGAKAKKALK KNMKKVAASA SSSQLPLPQN PKPSADFLPL EGGPARKAPV TTPPLQNKAT VLYIGRIPHG FYETEIEAFF SQFGTVKRVR VARNKKTGKS
101: KHFGFIQFED PEVAEIAAGA MNDYLLMEHM LKVHVIEPEN VKPNLWRGFK CNFKPVDSVQ IERRQLNKER TLEEHRKMLQ KIVKKDQKRR KRIEAAGIEY
201: ECPELVGNTQ PVPKRIKFSE ED
101: KHFGFIQFED PEVAEIAAGA MNDYLLMEHM LKVHVIEPEN VKPNLWRGFK CNFKPVDSVQ IERRQLNKER TLEEHRKMLQ KIVKKDQKRR KRIEAAGIEY
201: ECPELVGNTQ PVPKRIKFSE ED
Arabidopsis Description
AT5g04600/T32M21_200 [Source:UniProtKB/TrEMBL;Acc:Q9LZ65]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.