Factsheet for GSMUA_Achr1P24790_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10730_001	Banana	plastid	45.11	42.01
GSMUA_Achr6P36810_001	Banana	mitochondrion	3.6	22.11
GSMUA_Achr3P27180_001	Banana	cytosol	16.47	20.43
GSMUA_Achr8P01620_001	Banana	cytosol	10.81	19.87
GSMUA_Achr10P...	Banana	mitochondrion	15.09	19.51
GSMUA_Achr7P21700_001	Banana	mitochondrion	14.24	19.3
GSMUA_AchrUn_...	Banana	cytosol	14.92	19.21
GSMUA_Achr9P23750_001	Banana	cytosol	16.47	19.12
GSMUA_Achr2P03840_001	Banana	cytosol	12.69	18.83
GSMUA_Achr8P13860_001	Banana	mitochondrion	16.3	18.66
GSMUA_Achr5P27680_001	Banana	plasma membrane	15.95	18.56
GSMUA_Achr4P28890_001	Banana	cytosol	14.07	16.87
GSMUA_Achr6P16340_001	Banana	cytosol	6.69	16.74
GSMUA_Achr8P14820_001	Banana	mitochondrion	13.89	16.6
GSMUA_Achr7P16760_001	Banana	cytosol	4.29	15.72
GSMUA_Achr4P21740_001	Banana	plastid	14.92	15.34
GSMUA_Achr11P...	Banana	plastid	13.04	14.79
GSMUA_Achr7P24720_001	Banana	plastid	15.27	14.76
GSMUA_Achr2P17520_001	Banana	cytosol	10.29	14.35
GSMUA_Achr9P08410_001	Banana	cytoskeleton, peroxisome, plastid	12.69	14.07
GSMUA_Achr2P20210_001	Banana	plastid	13.04	13.92
GSMUA_Achr4P28510_001	Banana	cytosol	9.95	13.88
GSMUA_Achr4P21110_001	Banana	cytosol	9.95	13.88
GSMUA_Achr6P13430_001	Banana	cytosol	12.52	13.8
GSMUA_Achr10P...	Banana	cytosol	12.35	13.66
GSMUA_Achr8P01600_001	Banana	mitochondrion	6.17	11.5
GSMUA_AchrUn_...	Banana	cytosol	3.77	10.14

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	Gene3D:3.20.20.60	MapMan:35.1
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955
EnsemblPlantsGene:GSMUA_Achr1G24790_001	EnsemblPlants:GSMUA_Achr1P24790_001	EnsemblPlants:GSMUA_Achr1T24790_001	InterPro:IPR015806	UniProt:M0S2T6	PFAM:PF00224
PRINTS:PR01050	PANTHER:PTHR11817	PANTHER:PTHR11817:SF28	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf
InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	UniParc:UPI000294E0C0	SEG:seg

Description

Whole genome shotgun sequence of line PN40024, scaffold_50.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G24790_001]

Coordinates

chr1:-:19239673..19241926

Molecular Weight (calculated)

63812.4 Da

IEP (calculated)

7.601

GRAVY (calculated)

-0.059

Length

583 amino acids

Sequence
(BLAST)

001: MLSLNLSGRS FCSSTIIFPY QMKHFPLQMK GNLRSYSIYV GRLEPYEKSC RSFVCNEKST SNSSIKHYVD HKPEDVQPPS AHPVDALASI LEELKAVRRC
101: LLASENRDLC RLNLCHRNYL DSAMNLCHHL ALKCLDLQRL NEDLCSVGLQ SLESIGPSVL PCIDTIIQLL ELSVGTTTAG EEGRNERAAA ASAMRERGFS
201: HATALFGPYQ DSGQVHVMVT AGKEAISNET LIADLLKAGA DVIRINCAHD DPTVWSEIVR IARQSSASLG KSCRVLMDLA GPKLRTASLL VNKIAAVRYI
301: TVETGDVLTL TRSCCVAEND LHDDRHDSTI ITCSSDHIFN SVKPGEPIAF DDGKIWGMIQ AKNSNAIVVM IVQANAMGSK LGTKKSINLP KSDTKLLRGL
401: TSKDLVDLHF VAANADIVGI SFIRDANDMA SVQRELEKRN VPALGLMLKI ETREAVDNLP QLLLQAMQSS NPIGVMIARG DLMVECGWDQ LGEIQKEIMA
501: VCSAAHIPVT WATEVLDILI KSGFPSRAEI TDVANAMKAS CIMLNKGKHV VDAVAALDSM LCKHTDRRRK KMPPNLPSKS SRL

Best Arabidopsis Sequence Match ( AT3G49160.1 )
(BLAST)

001: MVGLDSSHLL RDKILCFSSR SHINNQHKKT SYALSLNHMK LPIQRTLAFA LARGKGEAES FSRLEATFGD NTSTECTWSF DFPDSKDAMS HLKSEADLSG
101: SNGANNVASV IEKLNALRSH LLAAEKWNAS QLHLCDSKYL ECATNLVHYM ALRSLDIEQL NSHLASLGLS SLDNNNLDVL AHLNASINLL MNDQNAVTES
201: WTNVYPKGKS TKKNDKGRVL SYKESLLGKL REGRSTHIMV TIGEEATLSE TFITDILKAG TSVIRINCAH GDPSIWGEII KRVRRTSQML EMPCRVHMDL
301: AGPKLRTGTL KPGPCVMKIS PKKDAYGNVV SPALVWLCLT GTEPPAHVSP DATISVQGQD FLAGLQIGDS IRLCDARGRK RRLKISKEFH VFNSTGFVAE
401: CFDTAYIESG TELSVKGKKG RRLVGRVVDV PPKESFVRLK VGDLLVITRE GSLDEPSVTV PGAHRLTCPS GYLFDSVKPG ETIGFDDGKI WGVIKGTSPS
501: EVIVSITHAR PKGTKLGSEK SINIPQSDIH FKGLTSKDIK DLDYVASHAD MVGISFIRDV HDITVLRQEL KKRKLDDLGI VLKIETKSGF KNLSLILLEA
601: MKCSNPLGIM IARGDLAVEC GWERLANMQE EIIAICKAAR VPVIMATQVL ESLVKSGVPT RAEITDAANA KRASCVMLNK GKNIVEAVSM LDTILHTKLI
701: YKKSDSENLH

Arabidopsis Description

PKP4Plastidial pyruvate kinase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.