Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g09940.t01 | Wine grape | plastid | 37.55 | 37.34 |
| VIT_07s0129g01110.t01 | Wine grape | plastid | 37.73 | 36.06 |
| VIT_10s0071g00310.t01 | Wine grape | cytosol | 17.66 | 23.0 |
| VIT_08s0007g07030.t01 | Wine grape | cytosol | 11.9 | 18.29 |
| VIT_05s0020g02400.t01 | Wine grape | cytosol | 20.45 | 18.0 |
| VIT_14s0060g01970.t01 | Wine grape | cytosol, plastid | 19.33 | 16.17 |
| VIT_06s0004g07520.t01 | Wine grape | cytosol | 19.14 | 15.56 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 18.59 | 14.99 |
| VIT_11s0016g05410.t01 | Wine grape | cytosol | 18.22 | 14.78 |
| VIT_18s0001g15010.t01 | Wine grape | mitochondrion | 11.52 | 14.49 |
| VIT_08s0058g00700.t01 | Wine grape | cytosol | 17.1 | 13.88 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100852716 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EMBL:AM469305 | ProteinID:CAN81430 |
| ProteinID:CAN81430.1 | ProteinID:CCB44856 | ProteinID:CCB44856.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F6GY18 |
| EMBL:FN594968 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PANTHER:PTHR44356 | PANTHER:PTHR44356:SF1 | SMART:SM00256 |
| SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI00021080DE | ArrayExpress:VIT_18s0072g00820 | EnsemblPlantsGene:VIT_18s0072g00820 |
| EnsemblPlants:VIT_18s0072g00820.t01 | RefSeq:XP_010665121.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr18:-:20173049..20175009
Molecular Weight (calculated)
57039.3 Da
IEP (calculated)
9.031
GRAVY (calculated)
0.051
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQASSSCTA LASAEISVKV EVGSGSSRWR GVGGDGDGDL TLGLPDECLA GVFGKLGCHD RNTCSLVCRR WRAVDSKSRQ RLVLLARSDV SPFLPALLCR
101: FSSVSVLSLK CSRKIVSIDD LALSRIPTLL ASLKKLKLKG CIDVTDEGLH AFSLHRPLLL TKLSFASCGF GAGGLISLIS NCPSLQDLTL KRLRKLDAQN
201: VPLSFDHPHR LERLCIKDLH NARLFIPLLA ASKTLKALVV CRSSGNWDPL LESLQRGGAT SVSEIQMENV QMGDPGLVAI SASCPDLEVL YLSRASDCTD
301: DGVSAIANSC RKLRKLHIDA WSRFGSRTIG DDGVLSIATR CSNLQEVVLM GIPVTVGSFN MFASNCPVLE RMAICNTDTV GDSELAVIAS KFTALKKLCI
401: KNCPISDTGV KAVGEGCPSL VKLKVKRCRG VTQVSVSQLR LQRGSVVVSV DAGSMIFEEG MAMAEEETGT AGGGGGGGGG VEGGGGERTR GGRISRRRST
501: STSTNVVCSS RGALLLRSKF ENALQLSRRS SSSIHAPR
101: FSSVSVLSLK CSRKIVSIDD LALSRIPTLL ASLKKLKLKG CIDVTDEGLH AFSLHRPLLL TKLSFASCGF GAGGLISLIS NCPSLQDLTL KRLRKLDAQN
201: VPLSFDHPHR LERLCIKDLH NARLFIPLLA ASKTLKALVV CRSSGNWDPL LESLQRGGAT SVSEIQMENV QMGDPGLVAI SASCPDLEVL YLSRASDCTD
301: DGVSAIANSC RKLRKLHIDA WSRFGSRTIG DDGVLSIATR CSNLQEVVLM GIPVTVGSFN MFASNCPVLE RMAICNTDTV GDSELAVIAS KFTALKKLCI
401: KNCPISDTGV KAVGEGCPSL VKLKVKRCRG VTQVSVSQLR LQRGSVVVSV DAGSMIFEEG MAMAEEETGT AGGGGGGGGG VEGGGGERTR GGRISRRRST
501: STSTNVVCSS RGALLLRSKF ENALQLSRRS SSSIHAPR
001: MNIYIFSKEK KRKKVVCDNL SKTRGSRREH CEPHRRRMGQ STSKFRRSKT TFTSPVLPNL REQNSGADEP YDYISNLPDE CLSLIFQSLT CADLKRCSLV
101: CRRWLTIEGQ CRHRLSLKAQ SDLISVIPSL FTRFDSVTKL VLRSDRRSLG ICDNAFVMIS VRCRNLTRLK LRGCPEISDL GIIGFTENCR SLKKVSFGSC
201: GFGVKGMNAL LNTCLGLEEL SVKRLRGIGA GAELIGPGGA AGSLKVICLK ELHNGQCFAP LLSGAKGLRI LKIFRCSGDW DRVFEAVRDK VNAIVEIHLE
301: RIQMSDLGLT ALSKCSGVEV LHLVKTPDCT NVGLALVAER CKLLRKLHID GWKTNRIGDE GLIVVAKYCW NLQELVLIGV NPTKLSLEAI VSNCLNLERL
401: ALCGSDTVGD TELCCIAEKC LALRKLCIKN CPITDDGIKA LGNGCPNLLK VKVKKCRGVT TQGADLLRKR RALLVVNLDA PETPIVEGSV GEGGAQENAV
501: EFPPSRLQIP TIGLASGSTS RSSSFKLRLG FLSQRNFVSC ALRRLGSRSR SRNE
101: CRRWLTIEGQ CRHRLSLKAQ SDLISVIPSL FTRFDSVTKL VLRSDRRSLG ICDNAFVMIS VRCRNLTRLK LRGCPEISDL GIIGFTENCR SLKKVSFGSC
201: GFGVKGMNAL LNTCLGLEEL SVKRLRGIGA GAELIGPGGA AGSLKVICLK ELHNGQCFAP LLSGAKGLRI LKIFRCSGDW DRVFEAVRDK VNAIVEIHLE
301: RIQMSDLGLT ALSKCSGVEV LHLVKTPDCT NVGLALVAER CKLLRKLHID GWKTNRIGDE GLIVVAKYCW NLQELVLIGV NPTKLSLEAI VSNCLNLERL
401: ALCGSDTVGD TELCCIAEKC LALRKLCIKN CPITDDGIKA LGNGCPNLLK VKVKKCRGVT TQGADLLRKR RALLVVNLDA PETPIVEGSV GEGGAQENAV
501: EFPPSRLQIP TIGLASGSTS RSSSFKLRLG FLSQRNFVSC ALRRLGSRSR SRNE
Arabidopsis Description
FBL8Putative F-box/LRR-repeat protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.